Stenotrophomonas sp. MYb57: CLM74_02790
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Entry
CLM74_02790 CDS
T05384
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00521
Streptomycin biosynthesis
stem00523
Polyketide sugar unit biosynthesis
stem00525
Acarbose and validamycin biosynthesis
stem00541
Biosynthesis of various nucleotide sugars
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01250
Biosynthesis of nucleotide sugars
Module
stem_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CLM74_02790 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLM74_02790 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CLM74_02790 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLM74_02790 (rfbB)
00525 Acarbose and validamycin biosynthesis
CLM74_02790 (rfbB)
Enzymes [BR:
stem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CLM74_02790 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
adh_short
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AVJ31780
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All DBs
Position
613551..614606
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AA seq
351 aa
AA seq
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MPTWLVTGGAGFIGGNFVLEAVARGVKVINLDVLTYAGNLKTLSSLDGNPNHVFVQGDIG
DSALVSRLLAEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
DQGVAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLTK
GQVGETYNVGGNSEKQNIEVVQAICALLDQRRPRADGQPRSSQITYVADRPGHDRRYAID
ASKLKNDLGWEPAYTFEQGIGFTVDWYLDNQEWVNGVLDGSYRLQRIGTAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacatggcttgtcaccggcggcgccggattcattggcggtaacttcgttctcgag
gccgtcgcacgcggcgtcaaggtcatcaacctcgatgtgctgacctacgccggcaacctg
aagaccctgtccagcctggacggcaatcccaaccacgtgttcgtccagggtgacatcggc
gacagcgcgctggtttcacgcctgctggccgagcaccagcccgatgcggtgctgaacttc
gcggccgaaagccacgtcgaccgttccatcgacggcccgggcgcgttcatccagaccaat
gtcgtcggcactctcggcctgctcgaggctgtgcgcgattactggaaggcgctgccggcc
gatcagggcgtggccttccgcttcctgcatgtctccaccgacgaggtgtacggcaccctg
ggggagaccggcaagttcagcgaaaccaccccgtatgccccgaactcgccgtactcggcg
tccaaggccgcctcggaccatctggtgcgtgcgttccaccatacctacgggctgccggtg
ctgaccaccaactgctccaacaactacggtccgtaccacttcccggagaagctgatcccg
ctggtgatcgccaaggcgctggccggtgagccgctgccggtgtacggcgatggcaagcag
gtgcgtgattggctgttcgtgtccgaccactgcgaagcgatccgtaccgtgctgaccaag
ggccaggtgggcgagacctacaacgtcggcggcaactccgaaaagcagaacatcgaagtg
gtgcaggcgatctgcgcgctgctggaccagcgccgcccgcgtgcggacggccagccgcgc
agcagccagatcacctacgttgccgaccgcccgggccatgaccgccgttacgcgatcgat
gcctcgaagctgaagaacgacctgggctgggaaccggcctacacctttgaacagggcatc
ggcttcaccgtcgactggtacctggacaaccaggaatgggtgaacggcgtgctcgacggc
agctaccgcctgcagcgcatcggcaccgcggcctga
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