KEGG   Stenotrophomonas sp. MYb57: CLM74_03030
Entry
CLM74_03030       CDS       T05384                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
stem  Stenotrophomonas sp. MYb57
Pathway
stem03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:stem00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CLM74_03030 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:stem02044]
    CLM74_03030 (gspD)
Secretion system [BR:stem02044]
 Type II secretion system
  General secretion pathway protein
   CLM74_03030 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AVJ31826
LinkDB
Position
676050..678263
AA seq 737 aa
MNLRFLPWSFALTLLVGCSTVSAPHVQRNGNLQPSASAGQAAVDAQTEAADQAQGAPQAV
IRRGTGTMINREAARKPSPALHAASSGEATFNFEGESVHAVVKAILGDMLGQNYVIAPGV
QGTVTLATPKPVSPAQALNLLEMVLGWNNARMVYSGGRYNIVAADQALAGTVAPSTAPAS
SARGFEVRVVPLQFISATEMKKVLEPYARPNAIVNVDSGRNVITLGGTRAELENYLHTVE
IFDVDWLSGMSVGVFPIQSGKAEQVAADLEKVFGEESKTPSAGMFRFLPLENANAVLVIT
PQVRYLDQIQQWLDRIDTAGGSARLFSHELRYIKARDLAERLSEAFASSGNRGGSGSASL
APGAIPSQLGSEGDRGMDAGNSSSFNNQVGGGSSSGSGSSAGSLNLPQRQSGNVSISLEV
EGDRVGVSAVEETNTLLVRSTPQAWRSIREVIEKLDVMPLQVHIEAQVAEVGLTGDLKYG
VNWFFDNAVAGRALTGALSGLTLPAAAGGSWNTFAGAVTGTDGAGWAFTGHNGAAVVSAL
DKVTDVRLLQTPSVFVRNNAEATLNVGDKVPINTTTVNTGIGTSSYSSVQYIDTGVILKV
RPRVTRDGTVFLDIVQEISSASDVPENCNPQERNCNPRISTKKLATEAAVQSGDTIMLAG
LITDSATDGSSGIPGLSRIPVLGALFGQKSRTSRRSEVIVLLTPTIVRNGQEARTLTDEY
SQRFRAMEPLNQPRAKK
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgaatctgcgttttcttccctggtccttcgccctgacgctgctggtcggctgcagcacc
gtgtcggccccgcatgtgcaacgcaacggcaacctgcagccctcggccagtgccggccag
gctgccgtcgatgcgcagaccgaagcggccgatcaagcccagggggcgccgcaggcggtg
atccgccgtggcaccggcaccatgatcaaccgcgaagccgcgcgcaagccgtcgcccgcg
ctgcatgcggccagctccggtgaggcgaccttcaactttgaaggcgagtcggtgcacgcg
gtggtcaaggccatcctcggggacatgctcggccagaactacgtgatcgccccgggggtg
cagggcacggtgacgctggccacgcccaagccggtatcgccggcacaggcactgaacctg
ctggagatggtgctgggctggaacaacgcccgcatggtctacagcggtggccgctacaac
atcgtcgccgccgaccaggcactggccggcaccgtggcgccgagcactgcgccggcctcc
agcgcacgcggttttgaagtgcgcgtggtgccgctgcagttcatttccgccaccgagatg
aagaaggtgctggagccctatgcgcggcccaatgccatcgtcaacgtcgacagcggccgc
aacgtgatcaccctcggcggtacgcgtgcggaactggagaactacctgcataccgtcgag
atcttcgacgtcgactggctttcgggcatgtcggtgggtgtattcccgatccagtccggc
aaggccgagcaggtcgcggcggatctggagaaggtattcggcgaagagagcaagacgccc
agcgccggcatgttccgtttcctgccgctggaaaacgccaatgcagtgctggtgatcacc
ccgcaggtgcgctacctggaccagatccagcagtggctggaccgcatcgataccgccggc
ggcagcgcgcgcctgttctcgcatgaactgcgatacatcaaggcacgcgacctggccgaa
cgcctcagcgaagcctttgccagcagcggcaaccgcggcggctccggctcggcatcgctg
gcgccgggtgccattccctcgcagctgggcagcgagggcgaccgcggtatggacgcgggc
aacagcagcagtttcaacaaccaggtcggtggcggcagcagcagtggtagtggcagcagc
gccggcagcctgaacctgccgcagcgccagtcgggcaacgtcagcatcagcctggaagtg
gaaggcgatcgtgtcggcgtgtcggcggtggaggaaaccaacacgctgctggtgcgttcg
acaccgcaggcctggcgctcgatccgcgaggtgatcgaaaagctggacgtgatgccgctg
caggtacacatcgaagcgcaggtggccgaagtcgggctgaccggcgacctgaagtacggc
gtcaactggttcttcgacaatgccgtggcggggcgcgcgctgaccggcgcgctgtccggg
ttgaccctgccagcagcggccggcggctcctggaacaccttcgccggtgcggtgaccggt
accgatggcgccggctgggcgttcaccgggcacaacggtgcagccgtggtcagtgcgctg
gacaaggtcaccgacgtgcgcctgctgcagacgccctcggtgttcgtgcgcaacaacgcc
gaagccaccctcaacgtcggcgacaaggtgccgatcaacaccaccacggtcaacaccggc
atcggcaccagcagctacagctcggtgcagtacatcgacaccggcgtgatcctcaaggtg
cgcccgcgcgtcacccgtgacggtacggtgttcctggatatcgtgcaggagatcagcagc
gcatcggacgtgccggagaactgcaatccgcaggagcgcaactgcaatccgcgcatctcc
accaagaagctggccaccgaggcggcggtgcagagcggggacaccatcatgctggccggc
ctgatcaccgattcggccaccgatggcagcagcggcattcccggcctgagccggattccg
gtactgggcgcgctgttcggccagaagagccgcaccagccgtcgttcggaagtgatcgtg
ctgctgaccccgaccatcgtccgcaacggccaggaagcccgcaccctgaccgatgagtac
agccagcgcttccgcgcgatggaaccgctgaaccagccgcgcgcaaagaagtaa

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