Stenotrophomonas sp. MYb57: CLM74_03120
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Entry
CLM74_03120 CDS
T05384
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00260
Glycine, serine and threonine metabolism
stem00460
Cyanoamino acid metabolism
stem00630
Glyoxylate and dicarboxylate metabolism
stem00670
One carbon pool by folate
stem00680
Methane metabolism
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01120
Microbial metabolism in diverse environments
stem01200
Carbon metabolism
stem01230
Biosynthesis of amino acids
stem01240
Biosynthesis of cofactors
stem04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CLM74_03120 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CLM74_03120 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLM74_03120 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CLM74_03120 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CLM74_03120 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CLM74_03120 (glyA)
Enzymes [BR:
stem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CLM74_03120 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AVJ31843
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All DBs
Position
704396..705649
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AA seq
417 aa
AA seq
DB search
MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFDADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIV
AKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMAN
TLIERGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYLEQDCVDLANWIADVLDAPADEAVIARVRDAVSAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccatcgcc
gccgaaacccagcgccaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggcggtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgaacagctggcgatcgac
cgcctcaagcagctgttcgatgcggactacgccaacgtgcagccgcacagcggttcgcag
gccaaccaggccgtgtacttcgcgctgctgcagccgggcgataccatcctcggcatgagc
ctggcccacggcggccacctcacccacggcgccaaggtcaacgcctcgggcaagctgttc
aacgccgtgcaatacggcgtcaacgaccagggcctgatcgattacgacgaagtcgagcgc
ctggccctggagcacaagccgaagatggtcgtggccggcttctcggcctactcgcaggtg
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgtcgccggcctggttgctgctggcgtctacccgagcccgctggaacatgcg
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcgtc
gccaagggcgccgacgaagacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagcgctg
gagccgggcttcaaggcctaccagcagcaggtggtgaagaacgcgcaggcgatggccaac
acgctcatcgaacgcggctacaagattgtctccggcggcacccagaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggacgcggaagccgcactcggcaaggcc
catatcaccgtcaacaagaactcggtgccgaacgacccgcgttcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggcggtgaccacccgcggttacctggaacaggactgcgtg
gacctggccaactggatcgccgacgtgctcgacgccccggccgatgaggccgtgatcgcc
cgcgtgcgtgatgcggtcagcgcgcagtgccgcaagtacccggtctacggttga
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