Stenotrophomonas sp. MYb57: CLM74_03960
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Entry
CLM74_03960 CDS
T05384
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stem02000
]
CLM74_03960
Transporters [BR:
stem02000
]
Other transporters
Pores ion channels [TC:
1
]
CLM74_03960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AVJ31998
LinkDB
All DBs
Position
complement(888583..891321)
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AA seq
912 aa
AA seq
DB search
MRRQAMAWSIQLALMGVAASAAAQTPASSSVQQLDAVQVTGSRIPRAQMEGPAPITVINA
EQIRSSGFTTVPDVLRAMTQNGGETQSQQSSGGADFSPGAQQVDLRGLGPNHTLVLVNGR
RIADFPMPFKGRSNFTDVSNIPLGMIDRIEVLTGSASAIYGSDAIAGVVNFILKKKADGT
TIDMRMGTTTEGGGESFDMSLASGFSSGNFNAVYSVELQSQTPLWAYDRDIQDSTQDGPT
EGARIARRSYLRTDYNDDYLDPGAATCEALAGQNQGSTYRAFRPRYGYYCGSDSSIGYGT
ILSKRRGANGYASLSYDFDNGQQWFADVQLGYHTMSLMRDVTKWGRMAADGDESGYFNNE
ATGEIEFWQRQFSPEEMGGLDNAMVRSTQKTFSVTTGFKGNLTGNWDYEAALSHSQYQSR
ISWAQIIASKANDLFLGPQLGEDEDGFPIYNADPSRLYRPLTRAEYDSIAARTTYTPKSR
TETAALTLTNGALFTLPGGDAGFAATVEVGQQAYALNPDPLATGYYYYSWKDSDGKGSRN
RWATAAELRMPLHETVNLSVAGRYDQYRYSGHTIGKATWSGGLEWRPIDTLLVRGSYGTA
FRAPDLHYVFAGPGNDETSAEDLYNCRADAADDCADYERNVIRSRSGNRELEPETSTSWS
AGFVWSPATGLDLSADWFNIDMRDQVQDMDVRTILASEANCRLGSADIGSPTCVDALARI
TRTADGRLYGVHVNPINVARESTSGIDVGLRYRLQTGIGDFIFNGTHTWVKKHDFQRYAG
DVTEDQFAINSGFDIPRTKTSVSVTWEKDAWSATVYGSRLGKLPTSDSYDQVFDEESGDS
PWIKATYRYNASLQYRFDDHSRLSLSVVNVFNKMPPKDKTYTAYPYYDVSWFDSVGRTIN
LQYTHKFGGSAL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagacaggcgatggcgtggtcgatccagctggcgttgatgggcgttgctgcttcg
gcggcggcacagactcccgcttcctcttcggtacaacagctggatgcggtgcaggtgacc
ggctcacgcatcccgcgcgcccagatggaaggaccggcgccgatcactgtcatcaacgca
gagcagatccgctccagcggcttcaccaccgtgccggacgtgctgcgcgcgatgacccag
aacggcggtgagacgcagagccagcagtcctccggaggggccgatttctcgccgggtgcg
cagcaggtcgacctgcgcgggttggggccgaaccacaccctggtgctggtcaacggccgt
cgcatcgccgacttcccgatgccgttcaagggccgcagcaacttcaccgatgtgtccaac
attccgctgggcatgatcgaccgcattgaagtgctgaccggcagcgcgtcggcgatctac
ggctcggatgcaatcgccggcgtggtcaatttcatcctgaagaagaaggccgatggcacc
accatcgacatgcgcatgggcaccaccaccgaaggcggtggtgagtcgttcgacatgagc
ctggccagcggcttcagcagcggcaacttcaacgcggtgtacagcgtcgaactgcagtcg
cagacgccgctgtgggcctacgaccgcgacatccaggactcgacgcaggacggcccgacc
gaaggcgcgcgcatcgcccgtcgttcctacctgcgcaccgattacaacgatgactacctg
gacccgggcgcggcgacctgcgaggcgttggccgggcagaaccagggcagcacctaccgc
gcgttccgtccgcgctacggctactactgcggcagcgacagctcgatcggctacggcacg
atcctcagcaagcgccgcggcgccaacggctatgcctcgctcagctacgacttcgacaac
ggccagcagtggttcgccgacgtgcagctgggctaccacacgatgtcgctgatgcgcgat
gtcaccaagtggggccgcatggccgccgacggcgatgagtcgggttacttcaacaatgaa
gccaccggcgagatcgagttctggcagcgccagttctcgcccgaggaaatgggcgggctg
gacaatgcgatggtgcgcagcacgcagaagaccttcagcgtgaccaccggcttcaagggc
aacctgaccggcaactgggactacgaagcagcactgagccattcgcagtaccagtcgcgg
atcagctgggcgcagatcatcgcatccaaggccaacgacctgttcctgggcccgcagctg
ggcgaggacgaggacggcttcccgatctacaacgccgatccgtcgcgcctgtaccggccg
ctgacccgtgccgagtacgattcgatcgccgcacgcaccacctatacgccgaagtcgcgc
accgagacggctgcgttgaccctgaccaatggggcgctgttcaccctgcctggcggcgat
gccggctttgccgcgacggtggaagtgggccagcaggcctacgcgctcaacccggacccg
ctggcgaccggctattactactacagctggaaggattcggacggcaagggctcgcgcaac
cgctgggcgactgccgccgagctgcgcatgccgctgcatgagacggtcaacctgagcgtg
gccggccgttacgaccagtatcgctattcgggccacaccatcggcaaggcgacctggagc
ggcggcctggaatggcgcccgatcgacacgctgctggtgcgcggctcgtacggcaccgcg
ttccgtgcgccggacctgcactatgtgttcgccggcccgggcaacgatgagaccagcgcg
gaagatctgtacaactgccgcgccgacgccgccgatgattgcgcggattacgagcgcaac
gtgatccgcagccgcagtggcaaccgcgagctggaaccggaaaccagcacctcctggagc
gcgggcttcgtgtggtcgccggccaccggcctggacctgtcggccgactggttcaacatc
gacatgcgcgaccaggtgcaggacatggacgtgcgtacgatcctggccagcgaagcgaac
tgccggctgggcagcgccgacatcggctcgccgacctgcgtggatgccctggcccgcatc
acccgcaccgccgacggccgtctgtacggtgtgcacgtcaatccgatcaacgtggcgcgc
gagtccacctccggcatcgacgtcggcctgcgctaccgcctgcagaccggcatcggcgac
ttcatcttcaatggcacccacacctgggtgaagaagcatgacttccagcgctatgccggc
gatgtgaccgaagaccagttcgcgatcaacagcggcttcgatattccccgcaccaagacc
agcgtcagcgtgacctgggaaaaggacgcctggtcggccaccgtgtacggctcgcgcctg
ggcaagctgccgacctcggacagctacgaccaggtgttcgacgaggaaagcggcgacagc
ccgtggatcaaggcgacctaccgctacaacgcttcgctgcagtaccgcttcgacgatcac
tcgcggttgtcgctgtcggtggtcaatgtgttcaacaagatgccgccgaaggacaagacc
tatacggcgtacccgtactacgacgtgtcctggttcgacagcgtcggccgtaccatcaac
ctgcagtacacccacaagttcggtggcagcgcgctgtaa
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