Stenotrophomonas sp. MYb57: CLM74_04505
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Entry
CLM74_04505 CDS
T05384
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stem03032
]
CLM74_04505
03036 Chromosome and associated proteins [BR:
stem03036
]
CLM74_04505
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_04505
DNA replication proteins [BR:
stem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CLM74_04505
Chromosome and associated proteins [BR:
stem03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CLM74_04505
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CLM74_04505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF3168
DUF2267
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AVJ32092
LinkDB
All DBs
Position
997926..998198
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDAVAEAADLTKAESSRAVDAVVAAVTKALKDGDAVTLVGFGTFQVRDRAARTG
RNPKTGDTIKIAASKNPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccgaattgatcgatgccgttgctgaagctgccgacctgaccaaggccgag
tccagccgcgctgtcgatgccgtcgttgctgccgtcaccaaggcgctgaaggacggcgat
gcggtcaccctggttggcttcggtaccttccaggtccgcgaccgtgctgcccgcaccggc
cgcaacccgaagaccggcgacaccatcaagatcgctgcttcgaagaatccgtcgttcaag
gctggtaaggccctgaaggatgctgtaaactaa
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