Stenotrophomonas sp. MYb57: CLM74_04625
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Entry
CLM74_04625 CDS
T05384
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03030
DNA replication
stem03430
Mismatch repair
stem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM74_04625
03430 Mismatch repair
CLM74_04625
03440 Homologous recombination
CLM74_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stem03032
]
CLM74_04625
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_04625
Enzymes [BR:
stem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM74_04625
DNA replication proteins [BR:
stem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLM74_04625
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLM74_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
AAA_18
PIF1
AAA_7
AAA_19
AAA_2
AAA_30
Mg_chelatase
nSTAND3
AAA_assoc_2
Se-cys_synth_N
TsaE
AAA_lid_RFC1
ABC_tran
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
AVJ32109
LinkDB
All DBs
Position
1022501..1024597
Genome browser
AA seq
698 aa
AA seq
DB search
MEDGGLMSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTI
ARIFAKSLNCEQGTSADPCGQCAACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYM
PSRGKYKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFN
LKRLDEDQIQGQMTRILAAEEIESDPTAIVQLAKAADGSLRDGLSLLDQAIAYAGGALRE
DVVRTMLGTVDRTQVAAMLDALAEGDGPRLLQVVAALAEFSPDWSGVLDALAEGLHRIQV
QQLVPGASAAAEGLDASVFAERLRPEVVQLWYQMALNGRRDLPLAPSPRAGFEMAVLRML
AFRPAAAVPSVPRTPESSGGSAPAGTGQTGGGLAGSHEGAAPAAAAAPEAAAVTQAIAAP
VLAEATAQTPNPAPQREPEPESEPTPEPDPTPEPEPAPIKEPGSPLPMKAQLAPEAATPK
APAEADDLPPWATDAAGARDEALAAEMATPDAAMVAPWHEPPAPASPPVAEAVAAPERSF
RAEGIDIAPAPVAAKEKASPAGSVSDLACAEDWLDLIANSGLSGPSRQLAANAAFISCQH
GVLKLGLSPGFEYLRSERALAALGEVLEKSLGHALKIVVETVETEQVPAETLHQRADRQR
GERQQAAEAIFMDDPEVQLLIQQHGARVVSDSIRSFDE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtggcctgatgtcctatctcgtccttgcccgcaagtggcgtccgaagcgt
tttgccgagctggtgggccaggaacacgtggtccgtgcgctcagcaatgcgctcgacagc
ggccgggtccaccatgcgttcctgttcaccggtacccgcggcgtgggcaagaccacgatc
gcgcgcatcttcgccaagtcgctgaactgcgagcagggcaccagtgccgatccctgcggc
cagtgtgcggcctgcctggacatcgacgccggtcgctacatcgacctgctggaaatcgat
gctgcgtccaataccggcgtggacgatgtgcgcgaggtgatcgagaacgcccagtacatg
ccctcgcgtggcaagtacaaggtgtacctgatcgacgaagtgcacatgctgtccaaggcc
gcgttcaatgcgcttctgaagacgctggaagaaccgccggaacatgtgaagttcctgctg
gccaccaccgacccgcagaagctgccggtcaccgtgctcagccgctgcctgcagttcaac
ctcaaacgcctggatgaagaccagatccaggggcagatgacccgcattctcgccgccgag
gagatcgagtcggatccgaccgctatcgtgcagctggccaaggccgccgacggcagcctg
cgtgatggcctgtcgctgctcgaccaggccattgcctatgccggcggtgcgctgcgtgag
gatgtggtgcgcaccatgctgggcacggtcgaccgcacccaggtggcggccatgctcgat
gccctggccgagggcgatggcccgcgcctgctgcaggtggtggcggcgctggccgagttt
tcgccggactggagcggggtgctcgatgcgctggccgagggcctgcaccgcatccaggtg
cagcaactggtgccgggcgcgtccgccgctgccgagggactggatgccagcgtgtttgct
gaacgcctgcgcccggaagtggtccagctctggtatcaaatggccctgaatggtcgtcgc
gatctgccattggcgcccagcccgcgcgccggctttgaaatggccgtgctgcgcatgttg
gcgttccgccctgcggctgccgtgccgtcggtgccgcgtactccggaatcctccggtggc
agcgcaccggccggtacgggccagaccgggggcggccttgctggcagccacgaaggagct
gcaccggccgctgctgcggcaccagaagccgcagcggtcacccaggcaattgcggcaccc
gtgttggcggaggcgaccgcgcagacgccgaacccggcgccacagcgcgaacccgagccg
gaatccgagccgaccccggaaccagatccgacccctgaacctgaacctgctccgatcaag
gaacccgggtcaccgctgccgatgaaggcgcagttggctcccgaggcggccacgcccaag
gcacctgccgaggcagacgacctgccgccgtgggcgaccgacgcggctggcgcgcgcgat
gaagcgctggcggccgagatggcaacgcccgacgcggccatggtcgcgccgtggcacgag
ccgccggcgccggcttcaccgccggttgcagaggctgttgccgcgccggagcgttcgttc
cgtgccgagggtatcgacatcgccccggcgccggttgcggcaaaggaaaaagcttcgccg
gcaggcagtgtcagtgacctggcctgtgccgaagactggctcgacctgatcgccaacagt
ggcctcagcggtccgtcgcgacagcttgcggccaatgcggccttcatcagttgccagcat
ggggtcttgaaactgggcctttcgcccggatttgaatacctgcgctccgagcgcgcgctg
gcagcgttgggcgaggtgctggaaaagtcccttggtcacgcgctgaagatcgtggtcgaa
accgtggaaaccgagcaggtcccggccgagaccctgcaccagcgcgccgaccgccagcgt
ggcgagcggcagcaggctgccgaggccattttcatggacgacccggaagtccagctgctg
atccagcagcacggcgcccgggttgtttccgattccatccgttcttttgacgagtaa
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