Stenotrophomonas sp. MYb57: CLM74_05340
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Entry
CLM74_05340 CDS
T05384
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00450
Selenocompound metabolism
stem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CLM74_05340
Enzymes [BR:
stem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CLM74_05340
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CLM74_05340
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Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
AVJ32242
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All DBs
Position
complement(1161847..1163103)
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AA seq
418 aa
AA seq
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MNLSTPRPIEAPADAPDWARVRLDFPLLMREVHGKPLVYFDNANTGQKPVQVIGAVDEFY
RRYNANVSRAVHALGTEATDAYEGARNKLARFLNVRSNDLVLCSGTTFAINLVAYSWALP
RLKAGDVILVSRMEHHANIVPWQLVAQRTGATIRVAEITPDGALDLDALRAAMTAEVKLL
AVAHVSNVLGTINPVREICREARKRGIVTVVDGSQAAPHRKVDVTAIGCDFYAITGHKMC
GPTGTGALWARREHLDAMPPFLGGGEMIKEVSFDGTVFNDAPHKFEAGTPNIAGFIGLGV
AADYLQNVGLDHVEAREAELLAHFTEELRRVDGLRIIGEAPEKAAVVSFLIDGAHAHDLA
TLLDLEGVAVRSGQHCAHPLLQYYGVAATCRASLAFYNTHEEIERFMTALTKVRKLLG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtccaccccgcgaccgatcgaagcacccgccgacgcccccgactgggcacgc
gtgcgcctggacttcccgctgctgatgcgcgaagtgcacggcaagccgctggtctatttc
gacaacgccaacaccggccagaagccggtgcaggtgatcggcgcggtggacgagttctac
cgccgctacaacgccaacgtcagccgtgccgtgcatgcgctgggtaccgaggccaccgac
gcctacgaaggcgcacgcaacaagctggcccgtttcctcaacgtgcgcagcaacgacctg
gtgctgtgcagcggcaccaccttcgcgatcaatctggttgcctactcctgggccctgccc
cggctgaaggccggcgacgtgatcctggtgtcgcgcatggaacaccacgccaacatcgtg
ccgtggcagctggtcgcccagcgcaccggcgcgaccatccgcgtggccgagatcactccc
gacggcgcgctggacctggacgcactgcgcgcggcgatgaccgccgaggtcaagctgctg
gccgtggcccatgtctccaacgtgctcggcaccatcaacccggtccgcgagatctgccgc
gaagcgcgcaagcgcggcatcgtcaccgtggtcgacggctcgcaggccgccccgcaccgc
aaggtcgacgtcaccgcgatcggctgcgacttctacgccatcaccggccacaagatgtgc
ggcccgaccggcaccggtgcgctgtgggcgcgtcgcgagcacctggacgccatgccgccg
ttcctgggcggcggcgagatgatcaaggaagtcagcttcgacggcaccgtgttcaacgac
gccccgcacaagttcgaagccggcacccccaacatcgccggcttcatcggcctgggcgtg
gcggcggactatctgcagaacgtcggcctggaccacgtggaagcgcgcgaagccgagctg
ctggcgcacttcaccgaagagctgcgccgggttgacggcctgcgcatcatcggcgaggca
ccggaaaaggcggcggtggtgtcattcctgatcgacggcgcccatgcgcacgatctggct
accctgctggatctggagggtgtggccgtgcgctcgggccagcactgcgcgcatccgctg
ctgcagtactacggcgtggcggcgacctgccgtgcgtcgctggcgttctacaacacgcat
gaagagatcgagcggttcatgactgcgttgacgaaggtgcggaagttgctggggtaa
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