Stenotrophomonas sp. MYb57: CLM74_05500
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Entry
CLM74_05500 CDS
T05384
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
CLM74_05500
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA
AAA_22
AAA_16
nSTAND3
IstB_IS21
MEDS
DnaB_C
AAA_24
GvpD_P-loop
AAA_14
NPHP3_N
AAA_19
NACHT
AAA_29
AAA_18
PAXNEB
DEAD
AAA_5
Rad51
AAA_30
TrwB_AAD_bind
AAA
AAA_33
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AVJ32273
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Position
1201764..1203260
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AA seq
498 aa
AA seq
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MQARMRITTGIEGLDSIIGGGLPQARLYLLEGPPGSGKTTLSLQFLLEGLRRGERCLYIT
LSETAEELREVALAHGWSLDGLHLFELGSAEGAMGNGRLQSVLHSWEMELDETVNLIMSK
VDSIGPTRVVFDSLSELRLLAQDSLRYRRQILALKQFFAPKSATVFLVDDLTSTGDERDG
QLHSLCHGVVSLERLTLDFGPARRRMQVQKLRGVDFVAGYHDMVIRRGGVQIFPRLIASE
HHGRFVGTPISSGVAEIDRLLGGGPLRGTSTLLTGPAGSGKTNVALQYVWAACERGERSC
IFEFDERVGTLLARASALDIDLDKHLRSGMLEILQIDPAEVSPGEFSWNLRKSVEERNCR
VLVIDSLNGYVTAMPQEKQLMLQLHEMLSYLNQKGVATFMINPQHGLVGTMSTGSLNVSY
IADAVVLFRFFEAKGRIRKAISVIKNRGGAHEDTIRELKIDGRGITVSAALADFQGILTG
TPEFVGDSAALLGQSDVR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacgcatgcggatcacaaccggaattgaaggactggacagcatcattggcggc
gggttgccgcaggcgcggctgtacctgcttgaggggccgccgggctccggcaagaccacg
ctgtccctgcagttcctgctggaaggcctgcggcgcggcgagcgctgcctctacatcacc
ctgtccgagacggccgaggagctgcgcgaagtcgcgttggcgcacggctggtcgctggac
ggtctgcacctgttcgagctgggttcggccgaaggggcgatgggcaatggccgcctgcag
tcggtgctgcattcgtgggaaatggagctggacgagacggtcaacctgatcatgtccaag
gtggacagcatcgggccgacccgggtggtgttcgattcgttgtcggaactgcgcctgctg
gcgcaggattcgctgcgctatcgtcggcagatcctcgcactcaagcagttcttcgcgccc
aagagtgcgacggttttcctggtggacgacctgacgtccaccggcgatgagcgcgacggc
cagctgcacagcctgtgccacggcgtggtctcgctggaacgcctgaccctggacttcggc
cctgcccggcgccgcatgcaggtgcagaagctgcggggcgtcgatttcgttgccggctac
cacgacatggtgatccgtcgcggtggcgtgcagatcttcccccgcctgatcgcctcggaa
catcacggacggttcgtcggaacgcccatcagcagcggcgtggccgagatcgaccggctg
ctgggcggcggtccgctgcgcggtacctccaccctgttgaccggcccggccggcagcggc
aagaccaacgtggcgctgcagtatgtgtgggcggcctgcgagcgcggcgagcgcagctgc
atcttcgagttcgacgagcgcgtgggcacgctgctggcacgcgcttcggcgctggatatc
gatctggacaagcatctgcgctccggcatgctggagatcctgcagatcgacccggccgaa
gtgtcgcccggggagttctcctggaacctgcgcaagtccgtggaggagcgcaactgccgt
gtgctggtgatcgacagcctcaacggctacgtgaccgccatgccgcaggaaaaacagctg
atgctgcagctgcacgagatgctgtcctacctcaaccagaagggtgtggcgaccttcatg
atcaacccgcagcatgggctggtcggcaccatgtccaccggcagcctcaatgtgtcctac
atcgctgatgcggtggtgctgttcagattcttcgaagccaagggacgcatccgcaaggcg
atctcggtgatcaagaaccgcggcggtgcgcatgaagacaccatccgcgaactgaagatc
gacgggcgcggcatcacggtcagtgccgcattggccgatttccagggcatcctcaccggc
acgccggagttcgtcggcgacagcgcagcgctgctgggccagtccgatgtccgatag
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