Stenotrophomonas sp. MYb57: CLM74_07850
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Entry
CLM74_07850 CDS
T05384
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLM74_07850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_07850
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLM74_07850
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLM74_07850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AIP3
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AVJ32698
LinkDB
All DBs
Position
1723671..1725695
Genome browser
AA seq
674 aa
AA seq
DB search
MSDSFQLVSPYSPAGDQPDAIAKLTSNFEAGVAKQTLLGVTGSGKTYTIANVIQQVQKPT
LIMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLAATKTLLSRPDAIVVATVSAIYGLGAPEDYLSLRLILSKGERIDQRDLINHLTQLQ
YTRNEYELQRGTFRVRGEVIDVFPAESDSEALRIELFDGEVEKITMFDPLTGETMRNLMR
FTVYPKTHYATTRERVLAAVETIKVELKERLEQLYAQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKNAGEPPPTLFDYLPADALLVIDESHVTIPQIGAMFKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARCPRSIYVSATPGPYEFREAGEDMAELVVRPTGLID
PVVEIRPVGTQVDDLMSEANERIKAGDRVLVTTLTKRMAENLTEYLTEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNVRGKAILYADKITRSMQAAIDETDRRRTKQVEYNLEHGITPRSVARPIVDVLEGA
RSDAAEKESRKGKGKGRSGVAEDTIDYRSLSPAQLAARLKALEQRMYQHAKDLEFEDAAR
VRDQIRQLKEASLG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagttttcaacttgtctcgccgtattcgccggcgggagaccagcccgatgcc
atcgccaagctgaccagcaatttcgaggccggcgtcgccaagcagaccctgctgggcgtc
accggctcgggcaagacctacaccatcgccaacgtcatccagcaggtgcagaagccgacg
ctgatcatggcgccgaacaagaccctggcagcgcagctgtacggtgagttcaaggcgttc
ttcccgcacaacgcggtggagtacttcgtcagctattacgattactaccagccggaagcc
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgagcacatcgaa
cagatgcggctggcggcgaccaagaccctgctgtcacggccggatgcgatcgtggtggcg
accgtgtcggccatctacggcctgggtgcgccggaagactacctgtcgctgcgcctgatc
ctgtccaagggcgagcgcatcgaccagcgcgacctgatcaatcacctgacccagctgcag
tacacgcgcaacgaatacgagctgcagcgcggtaccttccgcgtgcgcggtgaagtgatc
gacgtgttcccggcggagtcggacagtgaggccctgcgcatcgaactgttcgatggcgag
gtggaaaagatcacgatgttcgatccgctcaccggcgagaccatgcgcaacctcatgcgc
ttcaccgtgtatccgaagacccactacgcgactacgcgtgaacgggtgctggcggcggtg
gaaaccatcaaggtcgagctgaaggagcggttggagcagctgtacgcgcagaacaagctg
gtcgaggcgcagcgcctggcccagcgcacccagttcgacctcgaaatgatggccgaagtc
ggtttctgcaacggcatcgagaactactcgcggcatttgaccggcaagaacgcgggcgag
ccgccgccgaccctgttcgattacctgccggctgatgcgctgctggtgatcgacgaatcg
cacgtgaccattccgcagatcggtgccatgttcaagggtgaccggtcgcgcaaggaaacc
ctggtcgagttcggcttccgcctgccgtcagcgctggacaaccgtccgctgcgcttcgag
gagtgggaggcgcgctgcccgcgcagcatctatgtgtcggcgacaccgggtccgtatgaa
ttccgcgaggccggagaggacatggccgagctggtcgtgcgcccgaccgggctgatcgac
cccgtggtggagatccgcccggtcggcacccaggtcgatgacctgatgagcgaggccaac
gagcggatcaaggccggtgaccgcgtgctggtcaccaccctgaccaagcgcatggccgaa
aacctcaccgagtacctgaccgagcacggcatccgcgtgcgctacctgcactcggacatc
gataccgttgaacgcgtggagatcatccgtgacctgcgtctgggcaagttcgatgtgctg
gtcggcatcaacctgctgcgcgaggggctggacatgcccgaggtctcgctggtggcgatc
ctggatgcggacaaggagggcttcctgcgctcgaccggctcgttgatccagaccatcggc
cgtgcggcgcgcaacgtgcgtggcaaggccatcctgtacgcggacaagatcacccgttcg
atgcaggcagcgatcgatgagaccgaccgccgccgcaccaagcaggtcgagtacaacctg
gagcacggcatcactccgcgctccgtggcgcggccgatcgtcgacgtgctggagggcgca
cgctcggacgccgccgagaaggagtcccgcaagggcaagggcaaaggccgttccggggtg
gcagaggacacgatcgactaccgttcgctcagtccggcgcagctggccgctcgcctcaag
gccctggagcagcggatgtaccagcatgccaaggacctggaattcgaggatgccgcccgg
gtgcgcgaccagatcaggcagctgaaggaagccagcctgggctga
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