Stenotrophomonas sp. MYb57: CLM74_08675
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Entry
CLM74_08675 CDS
T05384
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00020
Citrate cycle (TCA cycle)
stem00190
Oxidative phosphorylation
stem00650
Butanoate metabolism
stem00720
Other carbon fixation pathways
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01120
Microbial metabolism in diverse environments
stem01200
Carbon metabolism
Module
stem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
stem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
stem_M00149
Succinate dehydrogenase, prokaryotes
stem_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CLM74_08675
00650 Butanoate metabolism
CLM74_08675
09102 Energy metabolism
00190 Oxidative phosphorylation
CLM74_08675
00720 Other carbon fixation pathways
CLM74_08675
Enzymes [BR:
stem01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CLM74_08675
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Thi4
Pyr_redox_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AVJ32841
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Position
1877405..1879195
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFFDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTAEGKIYQR
PFGGMTTQYGEGPAAQRTCAAADRTGHAMLHTLYQQSLKHDARFMIEYFALDLIFDDEGA
CRGVLALDMSDGTLHLFRAQGVVLATGGYGRAYFSATSAHTCTGDGGGLAMRAGIAMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPGVIDDKLPGIAESARIFAGVDVHKQPIPVIPTVHYNM
GGIPTNYHGEVVRKDGENPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAATITPGAAHKTLPADACDKALGLLDKLRHANGDTPTSVIRDRMQRTMQADAAVFRTS
QTLKEGCEKMDKIFDSFQDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVSVDEKGKCSFDYRPVHMYTLTDDVSVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagattaccgaacacaagtacgacatggtcgtggtgggcgccggcggc
gccggcctgcgcgccacgttcggcctggccgccaagggcctgcagaccgtgtgcctgacc
aaggtcttcccgacccgttcgcacaccgttgctgcccagggcggtatctccgccgcgctc
ggcaacatgggcgaggacgactggcgttaccacttcttcgacaccatcaaggggtcggac
tggctgggcgaccaggacgccatcgagtacatgtgccgtgaagcgattccggcgatcatc
gagctcgagcactacggcgtgccgttcagccgcaccgccgaaggcaagatctaccagcgt
ccgttcggtggcatgaccacccagtacggcgaaggcccggcggcgcagcgtacctgcgcg
gcggccgaccgtaccggccacgcgatgctgcacacgctgtaccagcagtcgctgaagcac
gacgcacgcttcatgatcgagtacttcgcactcgacctgatcttcgatgacgaaggtgcc
tgccgtggtgtgctggcgctggacatgtccgacggcacgctgcacctgttccgcgcccag
ggcgtggtgctggccaccggcggctacggccgcgcctacttcagcgccacctcggcgcac
acctgcaccggcgacggtggcggcctggccatgcgcgccggcatcgccatgcaggacatg
gagttcgtgcagttccatccgaccggcatctacggcgccggctgcctgatcaccgagggt
gtccgcggtgaaggcggcatcctgcgcaacagcagcggcgagcgcttcatggagcgttac
gcaccgcactacaaggacctggcttcgcgcgacgtggtcagccgttcgatgaccatcgag
atccgcgaaggccgtggcgtgggcgagcacaaggaccacatcctgctcgacctgacccac
ctcggcccgggcgtgatcgacgacaagctgccgggcatcgccgagagcgcgcgcatcttc
gccggcgtcgacgtgcacaagcagccgatcccggtgattccgaccgtgcactacaacatg
ggcggcatcccgaccaactaccacggtgaagtggtgcgcaaggacggcgagaaccccgat
gcggtcgtgccgggcctgtacgccatcggcgaagcggcctgcgtttcggtgcacggtgcc
aaccgcctgggttcgaattcgctgctggacctggtggtgttcgggcgtgcggtggccaac
cgttgcgcggcgacgatcaccccgggcgcggcgcacaagaccctgccggccgacgcctgc
gacaaggcgctgggcctgctggacaagctgcgtcacgccaacggcgataccccgacttcg
gtcatccgcgatcgcatgcagcgcaccatgcaggccgacgcggcggtcttccgtaccagc
cagacgctgaaggaaggctgcgagaagatggacaagatcttcgattcgttccaggacgtg
aaggtctccgaccgttcgctggtctggaactcggacctgatcgagacctacgagctgaac
aacctgctgctgaatgcagtggcgacgatcaactcggccgagcagcgcaaggaaagccgc
ggcgcgcacgcgcacgaggacttcccggaccgcgacgacgtcaattggcagaagcacacc
ctggtcagcgtggacgagaagggcaagtgcagcttcgactaccgtccggtgcacatgtac
acgttgactgatgacgtgtccgtggtgccgccgaagccgcgcgtgtactga
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