Stenotrophomonas sp. MYb57: CLM74_09980
Help
Entry
CLM74_09980 CDS
T05384
Name
(GenBank) transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stem03000
]
CLM74_09980
Transcription factors [BR:
stem03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CLM74_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_IclR
HTH_31
MarR_2
TetR_N
HTH_23
HTH_Crp_2
Fe_dep_repress
HTH_20
HTH_3
HTH_11
HTH_10
MarR
HTH_7
TrmB
Motif
Other DBs
NCBI-ProteinID:
AVJ33074
LinkDB
All DBs
Position
2165549..2166598
Genome browser
AA seq
349 aa
AA seq
DB search
MNDNSDSSSKRSGKAVTVTDIARAIGVSRATVSLVLRGSPLVNVDTRARVEAELRRQRYV
YNRAAANLRRRTSSSIALVINDLSNPFFAEFASGVDEALGGRGYVTLLGSTGESPERQQA
VLSTLMEHTPAGLILSPAEGSDATLLRQVLGANANVLLFNRELEGADWDFLTLDNQHGAY
LATRHLIERGHRQIAFFGGHAASSSCHQRRAGFQQALAEAGLALPPGWMIESAPNRLEAA
ARTDELFVDGHRPSAAVCYNDTVALGLMLGLNSRGIRPGGDFAVTGFDDISEASVAVPPL
TTLTADPRERGRQAASLLLQRLEEPDAPPRRTVAPVQLRIRESSAARPN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaacagcgacagttccagcaagcgttccggcaaggcggtgacggtgaccgac
atcgcccgtgccatcggcgtttcgcgcgcgaccgtgtcgctggtgctgcgcggcagcccg
ctggtcaacgtcgatacccgcgcccgggtcgaggctgagctgcgccgccagcgttacgtc
tacaaccgcgctgcagcgaacctgcggcggcgcacgtcttccagcatcgccctggtcatc
aacgatctgtccaacccgttcttcgccgaattcgcctccggtgtggacgaggcactgggc
ggacgcggctacgtgaccctgctcggcagtaccggcgagtcgcccgagcggcagcaggcg
gtgctgtccacgctgatggaacacacgcctgcgggcctgatcctgtcgccggccgaaggc
agcgatgccacgctgctccggcaggtactgggcgccaacgccaacgtactgctgttcaac
cgcgaactggaaggcgccgactgggacttcctgaccctggacaaccagcatggtgcctac
ctggccacccgccacctgatcgagcgcggccatcgccagatcgcattcttcggtggccac
gcggcatcgagttcctgccaccagcgtcgtgccggtttccagcaggcactggccgaagcc
gggctggcattgccgccgggctggatgatcgaatctgcacccaaccgcctggaagcggcc
gcgcgcaccgatgaactgttcgtcgacggccatcggccgagcgcagcggtctgctacaac
gacaccgtcgcgctgggcctgatgctgggcctgaactcgcgcggcatccgtcccggcggt
gacttcgcggtgaccggcttcgacgatatttccgaagcgtcggttgccgtgccgccgttg
accacactgacggccgacccgcgcgaacgcgggcggcaggcggcatctctgctgctgcag
cggctggaggaaccggatgcgccaccacggcgcacagtcgccccggtacagttgcgcatc
cgcgaaagcagcgccgcacgtccgaattga
DBGET
integrated database retrieval system
