Stenotrophomonas sp. MYb57: CLM74_10255
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Entry
CLM74_10255 CDS
T05384
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00061
Fatty acid biosynthesis
stem00071
Fatty acid degradation
stem01100
Metabolic pathways
stem01212
Fatty acid metabolism
stem02024
Quorum sensing
stem04146
Peroxisome
Module
stem_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CLM74_10255
00071 Fatty acid degradation
CLM74_10255
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CLM74_10255
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLM74_10255
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stem01004
]
CLM74_10255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stem04147
]
CLM74_10255
Enzymes [BR:
stem01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CLM74_10255
Lipid biosynthesis proteins [BR:
stem01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CLM74_10255
Exosome [BR:
stem04147
]
Exosomal proteins
Exosomal proteins of breast milk
CLM74_10255
Exosomal proteins of breast cancer cells
CLM74_10255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
AVJ33122
LinkDB
All DBs
Position
complement(2232884..2234560)
Genome browser
AA seq
558 aa
AA seq
DB search
MSLDRPWLQSYPKGVPAEIDVNEFHSVVSVFDASVAKYRDRPAYSSFGKTLTYGETDALV
EQFAAYLLGELKLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTARELKHQLV
DAGVTALVVVDNFGDTVEQVIADTQVKQVITTGLGDLLGAKGTIVNFVLKYVKKMVPNYH
LKGAIRFKQALKLGSRHTLPKVEIDHDDVAFLQYTGGTTGVAKGAMLTNRNLIANMQQAS
AWISASGIEMGKEWIITALPLYHIFALTANGLVFMKFGGCNHLITNPRDMKGFVKELKSV
RFTAITGVNTLFNGLLNTPGFDTVDFSSLKVTLGGGMAVQRAVAERWKKTTGVTLVEAYG
LTETSPAACINPLTLAEYNGSIGLPIPSTDACIKDDNGNILALGEVGELCIRGPQVMKGY
WQRPEETAKAIDADDWLHTGDMAKMDEHGFFYIVDRKKDMILVSGFNVYPNEVEDVIAMM
PGVLEVAAVGVPDEKSGEVVKVVIVKKDPHLTAEMVKEHARANLTGYKHPRIVEFRKELP
KTNVGKILRRELRDTPAP
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcgtccctggctgcagagctatccgaaaggcgttcccgccgaaatcgac
gtcaacgagttccattcggtagtttcggtcttcgacgcctccgtcgcgaagtaccgcgac
cgaccggcctactccagtttcggcaagaccctcacctacggtgagaccgacgccctggtc
gaacagttcgccgcttacctgctgggcgagctgaagctcaagaagggcgaccgcgtcgcc
ctgatgatgcccaactgcctgcaatacccgatcgccaccttcggcgtgctgcgtgccggc
ctgaccgtggtcaacgtcaacccgctgtacaccgcgcgcgagctgaagcatcagctggtc
gatgccggcgtgaccgcgctggtggtggtggacaacttcggcgacaccgtcgaacaggtc
atcgccgatacccaggtcaagcaggtcatcaccaccggcctgggcgacctgcttggcgcc
aagggcacgatcgtcaacttcgtgctcaagtacgtcaagaagatggtgcccaactaccat
ctgaagggcgcgatccgcttcaagcaggcgctcaagctgggcagccgccacaccctgccg
aaggtcgagatcgaccatgacgacgtggcgttcctgcagtacaccggcggcaccaccggt
gtcgccaagggcgcgatgctgaccaaccgcaacctgatcgccaacatgcagcaggcctcg
gcctggatcagcgcgtcgggcatcgagatgggcaaggaatggatcatcaccgccctgccg
ctgtaccacatcttcgcgttgacggcgaacggtctggtcttcatgaagttcggtggctgc
aaccacctgatcaccaacccgcgtgacatgaagggcttcgtcaaggagctcaagtcggtg
cgcttcaccgcgatcaccggcgtcaacacgctgttcaacggcctgctcaacacccccggc
ttcgacaccgtcgatttctcctcgctgaaggtgaccctgggcggcggcatggccgtgcag
cgtgcggtcgccgagcgctggaagaagaccaccggcgtcaccctggtcgaggcctacggc
ctgaccgagacctcgccggcggcctgcatcaacccgcttaccctggccgagtacaacggc
tcgatcggcctgccgattccgtccaccgatgcctgcatcaaggacgacaacggcaacatc
ctggcgctgggcgaagtgggcgaactgtgcatccgcggcccgcaggtgatgaagggctac
tggcagcgcccggaggaaaccgccaaggccatcgacgccgacgactggctgcacaccggc
gacatggcgaagatggacgagcacggcttcttctacatcgtcgaccgcaagaaggacatg
atcctggtgtccggcttcaacgtgtaccccaatgaagtcgaggacgtgatcgcgatgatg
ccgggcgtgctggaagtggccgcggtcggcgtaccggacgagaagtccggcgaggtggtc
aaggtggtcatcgtcaagaaggacccgcacctgaccgccgagatggtcaaggagcacgcc
cgggccaacctgaccggctacaagcaccccagaatcgttgaattccgaaaagagctgccg
aagaccaacgtcggcaagatcctgcgtcgcgaactccgcgatacgcccgccccgtaa
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