Stenotrophomonas sp. MYb57: CLM74_10515
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Entry
CLM74_10515 CDS
T05384
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem02020
Two-component system
stem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLM74_10515
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CLM74_10515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stem03000
]
CLM74_10515
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
stem02035
]
CLM74_10515
Transcription factors [BR:
stem03000
]
Prokaryotic type
Helix-turn-helix
Other families
CLM74_10515
Bacterial motility proteins [BR:
stem02035
]
Flagellar system
Flagellar assembly proteins
Others
CLM74_10515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
AAA_19
bpMoxR
AAA
AAA_30
MCM
UPF0175
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AVJ33171
LinkDB
All DBs
Position
complement(2294055..2295560)
Genome browser
AA seq
501 aa
AA seq
DB search
MSESRILVLDNDAVRAERTVALLEFMDFNPRWVSDAADFDLTRQRQNDWMAVIVGSLDDS
AASTALYAWLGGSSLPPPVLLADGDATAFAQRHGLHEANIWPLEAPLRHAQMEALLRRAS
LKRLDAEHQAGAVQDQGPTGNGPAVSALRTMIEQVAAFDTTVLVLGESGTGKEVVSRSIH
QRSPRRDGPFVAINCGAIPAELLESELFGHEKGAFTGALTARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVIAATHRDLESRIADGKFREDLFYRLN
VFPIDVPALRERREDLPALVETIATQLARTGRGEVRFTPEALQALAGYEWPGNVRELTNL
VERLAVLHPGGSVRVQDLPARYRGDAALAVPAVVAAAPVVASEERLDLRSFSFHTPGSGN
QPLLEHGIAVNRAAAPAALPDDGLDLRNHMANIELGLINEALERTQGVVAHAAQLLGLRR
TTLVEKLRKYGIEREAAELAS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaatcgcgcatcctggtactggacaacgacgcggtgcgtgccgagcgcaccgtg
gccctgctggaattcatggacttcaacccgcgctgggtttccgacgcggccgatttcgac
ctgacgcgccagcgccagaacgactggatggcggtgatcgtcggcagcctggacgacagt
gccgccagcaccgccctgtacgcctggctggggggcagcagcctgccgccgccggtgctg
ctggccgacggtgacgcgactgcgttcgcgcagcggcatggcctgcacgaagccaacatc
tggccgctggaagcaccgctgcgtcacgcacagatggaagccctgctgcgccgcgccagc
ctcaagcgcctggatgccgaacaccaggccggtgccgtgcaggaccagggaccgaccggc
aacggtccggcggtcagcgcactgcgcacgatgatcgagcaggtcgccgcgttcgacacc
accgtgctggtgctgggcgaatcgggcaccggcaaggaagtggtctcgcgcagcatccac
cagcgctcgccgcgccgcgatggcccgttcgtggcgatcaactgcggcgcgattccggcc
gaactgctggaaagcgagctgttcggccacgaaaagggcgccttcaccggcgcgctgacc
gcacgcaagggccgtttcgaaatggccgagggcggcaccctgctgctcgatgagatcggc
gacatgagcctgccgatgcaggtcaagctgctgcgcgtgctgcaggagcgcagcttcgag
cgcgtcggcggcaaccagaccatccgctgcaacgtgcgggtgatcgccgcaacccatcgc
gacctggaaagccgcattgccgatggcaagttccgcgaggacctgttctatcgcctcaac
gtgttcccgatcgatgtgccggccctgcgcgaacgtcgcgaagacctgccggcgctggtg
gaaaccatcgccacccagctggcgcgcaccggccgcggcgaagtgcgcttcaccccggaa
gcgctgcaggcgctggccggctacgaatggccgggcaacgtgcgcgaactgaccaacctg
gtcgagcgcctggccgtgctgcacccgggtggctcggtgcgcgtgcaggacctgccggca
cgctaccgcggcgacgccgcgctggccgtgcctgctgtggtcgcggccgctccggtggtc
gccagcgaagaacgcctggacctgcgcagcttctcgttccacaccccgggcagcggcaac
cagccgttactcgagcatggcatcgccgtcaaccgcgccgcagcgccggccgcgttgccg
gacgacggcctggacctgcgcaaccacatggccaacatcgaactgggcctgatcaacgaa
gcactggaacgcacccagggcgtggttgcccacgccgcccagctgctcggcctgcgccgc
accaccctggtggaaaagctgcgcaagtacggcatcgaacgcgaagcggccgaactggcc
agctga
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