Stenotrophomonas sp. MYb57: CLM74_10660
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Entry
CLM74_10660 CDS
T05384
Name
(GenBank) GGDEF domain-containing protein
Organism
stem
Stenotrophomonas sp. MYb57
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AVJ33199
LinkDB
All DBs
Position
2324519..2327278
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AA seq
919 aa
AA seq
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MDQGIIASLLQHPLASALVIVDRSGRPLAANPAAREHGLPATVAAYAPMLEDLRLLAADG
GIVACTLPGGPRGHYDGHLRAVHDGSGNLLAFTLSVPEPVPVDGGGRWELALDSAGHSLW
DWDIPSDRVARTPALGEETATQILARVHADDITQVRAALDEHLHGDSEQYSAQFRFRQAD
GQWRWVLDRGRVVARTADGQPLRMVGTHTDIEQQKQLEALLQEQQLHLREAQRIASMGSW
SFDPHSRQFWWSPELRSLLALRQDSIPGQRRWLKQLHPRSRGALRAAWRRLWRDGRAANL
ELELTRGNEPSQHLRLWMQPLLDMDGQPKRLLGQVQNITEQHQTDALIRWRTELLNRVSA
LGRIGGCEIEVATRNMQWTEECYRIHGLRKEPITLDQALALYAEDSRAAFEAALGRIAGG
GLPEQLDLCFYRQSGLRVWVQVLIELDRRDGLPPRFVVLFRDITREREANERIELLAHYD
LLTGLPNRVLLGEQTSEAIEEARDRGTSLAMLFIDLDGFKNINDSFGHATGDALLKAAAT
RLHQNLRNNDLFGRFSGDEFIVVLRDLAEPEDAGHVARKLINSLAEPLRRGDTTLKVGAS
VGIAMLGESQTDFDSLLRAADAAMYAAKEAGRNTYQYYSQDALARIQRRLEIEHGLHGAI
ERDEFSLAYQPLLHAHHGEPPAIEALLRWHRPGIGYCSPAEFIPIAEKCGEIVRIGDWVL
SEACRQAAAWDRAGLHFERIAVNVSAVQLRDRGFAERVIEICHAHGWPPQRLELELTESA
LIRDTDILRHCFDVLERHGVPLAVDDFGTGFSNLNYLNRFPVGRLKIDRSFVQGMLHDSG
TAEVTQAIVHLGHALGMKVVAEGVETHQEEDMLRRQGCDEIQGYLYSRPLTPRDLAQWLR
QQHLAPGRTDAASEVMLAR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtggaccaagggatcatcgccagcctgctgcagcatccgctcgcctcggcgctggtcatc
gtcgaccgcagcgggcgcccgctcgcggccaatccggctgcgcgcgagcatggcctgccg
gccacggtggccgcctacgcgccgatgctggaagacctgcgcctgctggccgccgacggt
ggcatcgtcgcctgcacgctgccgggcggcccgcgcggccactacgatggccacctgcgc
gccgtgcatgacggcagcggcaacctgctcgccttcaccctcagcgtgcccgagccggtg
ccggttgatggtggtggtcgctgggaacttgcactggacagcgccggccacagcctgtgg
gactgggacatccccagcgaccgcgtggcgcgcacgcccgcactgggtgaggaaacggcc
acgcagatactggcgcgcgtgcacgccgacgacatcacccaggtgcgcgccgcgctggat
gaacacctgcacggtgacagtgagcagtacagcgcccagttccgcttccgccaggccgat
ggccagtggcgatgggtgctggaccgcggccgggtggtggcccgtaccgccgacggccag
ccgctgcgcatggtcggcacccataccgacatcgagcagcagaagcagctggaagccctg
ctgcaggagcaacagctgcatctgcgcgaagcccagcgcatcgccagcatgggcagctgg
tcgttcgatccgcacagccggcaattctggtggtcgccggaactgcgctcgctgctggcg
ctgcggcaggacagcatcccggggcagcgacgctggctcaagcagctgcacccgcgctca
cgtggtgcactgcgtgcggcctggcgccgcctgtggcgcgatggccgggccgccaacctc
gaactggaactgacccgcggcaacgaaccctcgcagcatctgcggttgtggatgcaaccg
ttgctggacatggacgggcagcccaagcgcctgctggggcaggtgcagaacatcaccgaa
cagcatcagaccgatgccctcatccgctggcgtaccgagctgctcaaccgcgtgtccgcg
ctgggtcgcatcggtggttgcgagatcgaagtggcgacgcgcaacatgcaatggaccgag
gagtgctatcgcatccacggcctgcgcaaggaaccgatcaccctcgaccaggcgctcgcg
ttgtatgccgaggattcgcgtgcggcgtttgaagccgcgctggggcgcattgccggtggc
ggcctgccggagcagctggatctgtgcttctaccgccagtccgggttgcgcgtatgggtg
caggtgctgatcgaactggaccgtcgtgatggcctgccgccgcgctttgtggtcctgttc
cgtgacatcacccgcgagcgcgaagcaaacgagcggattgaactgcttgcccattacgat
ctgctgaccggactgcccaaccgggtgctgctgggcgagcagacctccgaagccatcgag
gaagcgcgcgatcgcggcacctcgctggcgatgctgttcatcgacctggacggcttcaag
aacatcaatgacagcttcggccacgccactggcgatgcgctgctgaaggccgccgcgacc
cggctgcaccagaacctgcgcaacaacgacctgttcggccgcttcagcggcgacgagttc
atcgtggtgctgcgcgacctggccgaaccggaggatgccggacacgtggcgcgcaagctg
atcaattcgctggccgagccgctgcgccgtggcgacaccaccttgaaagtgggcgccagc
gtgggcatcgccatgctcggcgagagccagaccgacttcgattcgctgctgcgcgctgcc
gacgcggcgatgtacgcggccaaggaagctggtcgcaatacctatcagtattacagtcag
gacgcgctggcgcggatccagcgccggctggagatcgagcacggcctgcacggcgccatc
gagcgcgacgagttcagcctggcctaccagccactgctgcacgcccatcacggcgagccc
ccggcaatcgaggcgttgctgcgctggcatcgtccgggcattggttactgcagcccggca
gaattcattccgatcgccgaaaagtgcggcgaaatcgtccgcatcggcgactgggtattg
tccgaagcctgtcgccaggcagccgcgtgggatcgtgccggcctgcatttcgagcgcatc
gccgtaaacgtgtcggcagtgcagctgcgtgatcgtggctttgccgagcgcgtgatcgag
atctgccacgcgcacggctggccgccgcagcggctggagctggagctgaccgaatcggcg
ttgatccgtgacaccgacatcctgcgccactgcttcgatgtgctggaacggcacggcgtg
ccgctggcagtggacgacttcggtaccggcttctccaacctcaactacctcaaccgtttc
ccggtcggccgcctgaagatcgaccgcagcttcgtgcagggcatgctgcacgactcgggc
accgccgaggtgacccaggccatcgtccatcttggccacgcactgggcatgaaggtggtg
gccgagggcgtggaaacgcaccaggaagaggacatgctgcgccgccagggctgcgacgag
atccagggctacctgtactcgcgcccgctcacaccgcgcgacctggcgcagtggctgcgc
cagcagcacctcgccccaggccgcaccgatgccgccagcgaagtgatgctggcgcgctga
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