Stenotrophomonas sp. MYb57: CLM74_13015
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Entry
CLM74_13015 CDS
T05384
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00330
Arginine and proline metabolism
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CLM74_13015
Enzymes [BR:
stem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
CLM74_13015
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AVJ33623
LinkDB
All DBs
Position
complement(2848136..2850424)
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AA seq
762 aa
AA seq
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MYFKSLDYPVIVIDGDYDSPRIGGILIRALVEELRSNDQRVLCGLNLDDARAGARTYVAA
SAVLISIDGSEEVDGEFQRLTAFLREQSARRANLPVFLYGERRTIEKVPSKLLKYIHGFI
FLFEDTKSFISRQVMRAAEDYMQNLLPPFFKALIHHAAESNYSWHTPGHAGGVAFTKSPV
GRAFHQFYGENTLRSDLSISVPELGSLLDHTGPIKEAEDEAARNFGADHTFFVTNGTSTA
NKIVWHGTVARGDVVFVDRNCHKSLLHSLIMTGAVPVYFTPSRNAHGIIGPISLDQFTPE
ALQQSIAANPLASQAYQAGSKPRIAVVTNSTYDGLCYNAEKIAEEIGSAVDFLHFDEAWY
AYAAFHPFYENHYGMAKGKPREQDAIIFTTHSTHKLLAAFSQASMIHVRNSASRDLDAER
FNESFMMHTSTSPHYGVIAACDVASKMMEGDAGRSLVQEMHDEAIAFRRAMLHVRDDLGR
DDWWFSVWQPTKVERSLDKGDTPAPLVAKREEWYLQPDAHWHGFENLVDDYVLIDPIKVT
LLTPGLSMDGSMGKLGIPAAVLSKFLWGRGITVEKTNLYSVLFLFSMGITKGKWSTLVTE
LMAFKELYDRNAPLTQALPSLAADYPHAYAGWGLRDLCDALHAFNQEFAVAKVMREMYVD
LPTPVMTPADAYNHLVKGEIERVDIEQISGRIAATMLVPYPPGIPTIMPGERFGDRDEPI
IQSLRIAREQNARFPGFESDVHGLIIERDGDVPSYKVEVLKA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtgtatttcaagtccctggattatccggtcatcgtcattgacggtgactacgactcgccg
cgcatcggcggcatcctcatccgtgcgctggtggaagagctgcgcagcaatgaccagcgc
gtgctgtgcggcctgaacctggacgatgcccgtgccggcgcccgtacctatgtagccgct
tcggcggtgctgatctcgatcgacggcagcgaggaggtcgatggcgagttccagcgcctg
accgccttcctgcgcgagcagagtgcgcgccgggccaacctgccggtgttcctgtatggc
gagcgccgtaccatcgagaaggtgccgagcaagctgctcaagtacatccacggcttcatc
ttcctgttcgaagacaccaagagcttcatctcgcgtcaggtgatgcgtgcggccgaagac
tacatgcagaacctgctgccgccgttcttcaaggcgctgatccaccacgcggccgagtcg
aactattcctggcatacgccgggccatgccggcggcgtggctttcaccaagtcaccggtc
gggcgcgccttccaccagttctatggtgagaacacgctgcgcagcgatctgtcgatttcg
gtgccggagctgggctcgctgctggatcacaccggcccgatcaaggaggccgaggacgag
gccgcgcgcaacttcggcgccgaccacaccttcttcgtcaccaacggtacgtcgacggcc
aacaagatcgtgtggcatggcaccgtggcccgcggcgacgtggtgttcgtcgaccgcaac
tgccacaagtcgctgctgcattcgctgatcatgaccggcgcggtgccggtgtacttcacg
cccagccgcaatgcgcacggcatcatcggcccgatcagcctggaccagttcaccccggaa
gccctgcagcagagcatcgcggccaatccgctggccagccaggcctaccaggccggttcc
aaaccgcgtatcgcggtggtgaccaactcgacctacgacggcctgtgctacaacgccgag
aaaatcgccgaggagatcggcagcgcggtcgacttcctgcatttcgatgaggcttggtac
gcgtatgccgcgttccatccgttctacgagaaccactacggcatggccaagggcaagccg
cgcgagcaggacgcgatcatcttcaccactcattccacgcacaagctgttggccgcgttc
tcgcaggcctcgatgatccacgtgcgcaattcggccagccgcgacctggacgccgaacgc
ttcaacgaatcattcatgatgcatacctcgaccagcccgcattacggcgtgatcgcggcg
tgtgatgttgcctcgaagatgatggaaggggatgcggggcgttcgctggtgcaggaaatg
catgacgaggcgatcgccttccgcagggcgatgctgcatgtacgcgacgatctgggccgc
gatgactggtggttcagcgtatggcaaccgacaaaggtcgagcgcagcctggacaagggc
gatacaccggcaccgctggtcgccaagcgcgaggagtggtacctgcagcccgatgcgcat
tggcacgggttcgagaacctggtcgatgactatgtgctgatcgatccgatcaaggtgacc
ctgttgacgccggggctgtcgatggacggcagcatgggcaagctgggcatcccggctgcg
gtgctgagcaagttcctgtggggccgcggcatcaccgtggagaagaccaacctgtattcg
gtgctgttcctgttctcgatgggcatcaccaagggcaagtggagcacgctggttaccgag
ctgatggcgttcaaggagctgtacgaccgcaacgcgccgctgacccaggcgctgccgtcg
ctggccgccgactatccccatgcctatgccggctggggcctgcgtgacctgtgcgacgca
ttgcatgcgttcaaccaggagttcgccgtggccaaggtaatgcgtgagatgtacgtggac
ctgccgacgccggtgatgaccccggccgatgcctacaaccatctcgtgaagggcgagatc
gagcgggtcgacatcgagcagatcagcggccgcatcgctgcgacgatgctggtgccgtat
ccgccgggcatcccgacgatcatgccgggcgagcgcttcggcgaccgcgacgaaccgatc
atccagtcgctgcgcatcgcccgcgagcagaacgcgcgtttcccgggcttcgagtcggat
gtgcatggccttatcatcgagcgcgatggcgacgtgccgtcctacaaggtggaggtgctg
aaggcctga
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