Stenotrophomonas sp. MYb57: CLM74_14270
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Entry
CLM74_14270 CDS
T05384
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stem03009
]
CLM74_14270
Enzymes [BR:
stem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CLM74_14270
Ribosome biogenesis [BR:
stem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLM74_14270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AVJ33851
LinkDB
All DBs
Position
3106937..3108667
Genome browser
AA seq
576 aa
AA seq
DB search
MSDTPRKPSLNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEV
AQTGMSVKSGDRIELDGRGFVATALAEPSRVLVYNKPEGEVTTREDPEGRPTVFESLPAL
KGARWIAVGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEDKVPDAVV
DRLTRGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKVSLPRELARGQSVELPGSQVEALRAELKLEEGAPSALTLQPVIGQRRAAKTTVRVR
EGGRGNAYVNGHNTADEGRELRRFDNVREDRGRGRGGKGGGGFKGGLTVSGEAAAKQSQR
PFKQRAPKNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGAGAGGQG
RPYGKPKGPGAGAGGSQGRGGYGGEGRGGYGGEGRGGAGGAGGQGRPAGAGNRSQGQGNK
HPYGHPGNAPSFPSDHANPGFSPYGSSRPAGNGRPGGNANARPGGNRGPGAPGGNRGPGG
PGGNRGPGGPGGNRGPGGPGGNRGPGGPRRSGPRGG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgcaagccctcgttgaacaagctttcgctcaagcgcgaagccacg
tccgaacagttcaagctggaagaacgcctgcacaaggtcctggcccaggccggcctcggc
tcgcgtcgtgcgctggaacagcgcattgccgaaggcctggtcaaggtcaacggtgaagtc
gcccagaccggcatgtcggtcaagagcggcgacaggatcgaactcgacggccgcggcttc
gtcgccactgcgctggccgagccgtcgcgcgtgctggtctacaacaagccggaaggcgaa
gtgaccacgcgtgaagaccctgaaggtcgcccgaccgtgttcgaatccctgccggcgctg
aagggtgcccgctggatcgccgtcggccgcctggacatcaacaccaccggcctgctgctg
gcgaccaccgacggtgagctggccaacgccatgatgcacccctccttcgaggtcgagcga
gagtacgtggtgcgcgtgcgtgccccggaaggcgaggacaaggtgcccgatgccgtcgtc
gaccgcctcacccgtggtgtcgcgctggaagatggcccggccaagttcgatgagatcgaa
cgcatcggcggcaccgattcgcacgactggttccgcgtcgtggtgaaggaaggccgcaac
cgcgaagtgcgccgcctgtgggaatcgcagggctgccaggtcagccgcctcaagcgcacc
cgctacggcaaggtcagcctgccgcgcgaactggcccgcggccagtccgtcgaactgccg
ggcagccaggtcgaagcgttgcgcgccgaactgaagctggaagaaggcgcgccgtcggcc
ctgaccctgcagccggtgatcggccagcgtcgtgctgccaagaccaccgtgcgcgtacgc
gaaggtggccgcggcaacgcttacgtcaatggtcacaacaccgccgatgaaggtcgcgaa
ctgcgtcgcttcgacaacgtgcgcgaagaccgcggccgcggtcgcggcggcaagggtggc
ggcggtttcaagggcggcctgaccgtcagcggtgaagctgctgccaagcagtcgcagcgc
ccgttcaagcagcgcgcgccgaagaacgaccgctcgctgccggaaggcaacccggccgca
ttccgtacctggtacgtgccggatggcgtgagcaccggcccgagcggccaccgcaatgcc
ggtccgggcgctcgtggcccgggtgcccgtggtccgggcgcaggtgcaggcggccagggc
cgtccgtacggcaagccgaagggtccgggcgcaggcgccggtggcagccagggtcgtggc
ggctacggcggtgaaggtcgtggtggctacggtggtgaaggacgcggtggcgccggtggc
gcaggcggccagggtcgtccggccggtgcgggcaaccgctcgcagggccagggcaacaag
cacccgtacggccatccgggcaatgcccccagcttcccgtccgaccacgccaatccgggc
ttcagtccgtacggcagctcgcgtccggccggcaacggtcgtccgggcggcaatgcgaat
gcacgtccgggcggcaaccgtggtccgggtgctccgggcggcaatcgcggcccgggtggc
cccggcggcaaccgtggtcccggcggcccgggtggcaaccgcggcccgggtggccccggc
ggcaaccgtggcccgggtggcccgcgtcgcagcggcccgcgcggcggctga
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