Stenotrophomonas sp. MYb57: CLM74_14620
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Entry
CLM74_14620 CDS
T05384
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLM74_14620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_14620
Enzymes [BR:
stem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CLM74_14620
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CLM74_14620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AVJ33916
LinkDB
All DBs
Position
3179765..3181105
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AA seq
446 aa
AA seq
DB search
MQPRNNDVFTPSQLNTLARDLLEGSFPAIWVEAELGSVARPASGHLYFTLKDARAQLRAA
MFRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHMEEAGEGALRRAFEELKARL
EAEGLFDPARKRQMPAHVQRLAVITSPTGAAVRDVLSVLGRRFPLLEVDLLPTLVQGATA
AAQITRLLQAADASGRYDVILLTRGGGSLEDLWAFNDEALARAIAASGTPVVSAVGHETD
FSLSDFAADLRAPTPSVAAELLVPDQRDLALRLRRNAARMVQLQRHAMQQAMQRADRALL
RLNAQSPQARLDLLRRRQLDLGRRLHAAHNQQQERRAARLRHAAAVLRGHHPQRQMEALR
RRLAALGGRPQAALQRLLQRDALRLRGLARSLEAVSPLATVARGYSIVTRADDGALVRRI
EQVQPGDALQARVGDGVIDVQVTAVK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacgcaacaacgacgtcttcacccccagccagctcaacaccctggcgcgcgac
ctgctggaaggcagcttcccggcaatctgggtggaagccgaactgggcagcgtggcgcgg
ccggcgtccggccatctgtatttcaccctgaaggacgcgcgtgcacagttgcgcgctgcg
atgttcaggatgaaggcgcagtacctgaagttcgtgccgcgcgagggcatgcgcgtgctg
gtgcgcggcaaggtgaccctgtacgacgcccgtggcgagtaccagatggtgctggaccac
atggaggaagccggcgaaggcgcgctgcgtcgcgcgttcgaggaactgaaggcgcggctg
gaagccgagggactgttcgacccggcccgcaagcggcagatgccggcccacgtgcagcgc
ctggcggtgatcacctcgcccaccggtgccgccgtgcgcgatgtgctgagcgtgctcggc
cgccgcttcccgttgctggaagtggatctgctgccgaccctggtacagggcgcaaccgct
gccgcacagatcacccgcctgctgcaggccgccgatgccagcggtcgctacgacgtgatc
ctgctgacccgtggtggtggctcgctggaagatctgtgggccttcaacgatgaagcgctg
gcccgcgcaatcgccgccagcggcacgccggtggtctcggcggtgggtcacgaaaccgac
ttcagtctcagcgatttcgctgctgacctgcgcgcgcctacgccatcggtggccgcggaa
ctgctggtacccgatcagcgcgacctggccctgcgcctgcgccgcaacgcggctcgcatg
gtgcagctgcaacgccacgccatgcagcaggccatgcagcgcgctgatcgcgccctgctg
cgcttgaacgcacagagtccgcaggcacgactggatctactgcgccgtcgtcagctggac
ctcggacgtcgcttgcatgcggcgcacaaccagcagcaggagcgtcgcgcagcccgtttg
cgccacgctgccgcagtgttgcggggccatcatccgcagcggcagatggaggcgctgcga
cgtcgccttgccgcgttgggcgggcgcccacaagcggcgctgcagcgcctgctgcagcgt
gatgcgctgcgcctgcgtggccttgcacgttcgctggaagcggtcagtccgctggcgacc
gtcgcgcgtggctacagcatcgtgacccgtgcagacgatggcgcgctggtgcgccggatc
gagcaggtacaaccgggtgacgcactgcaggcccgggtcggcgacggcgtgatcgacgta
caggtgactgcggtcaagtaa
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