Stenotrophomonas sp. MYb57: CLM74_14820
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Entry
CLM74_14820 CDS
T05384
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stem03032
]
CLM74_14820
03036 Chromosome and associated proteins [BR:
stem03036
]
CLM74_14820
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_14820
DNA replication proteins [BR:
stem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CLM74_14820
Chromosome and associated proteins [BR:
stem03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CLM74_14820
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CLM74_14820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AVJ33950
LinkDB
All DBs
Position
complement(3214000..3214299)
Genome browser
AA seq
99 aa
AA seq
DB search
MALTKAEMAEKLFDEVGLNKREAKEFVDAFFDVLREALEQGRQVKLSGFGNFDLRRKNQR
PGRNPKTGEEIPISARTVVTFRPGQKLKERVEAYAGSGQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaccaaggcggagatggcggaaaagctgttcgacgaagtcggtctgaacaag
cgggaagccaaggaattcgtcgacgcgttcttcgatgtgctgcgtgaagcattggaacag
ggacgtcaggtgaagctgtcgggctttggcaatttcgacctgcggcgcaagaaccagcgc
ccaggtcgcaaccccaagaccggcgaggaaattccgatttccgcccgtacggtggttacc
ttccgtccgggccagaagctcaaggagagggtggaagcttatgctggatccgggcagtaa
DBGET
integrated database retrieval system
