Stenotrophomonas sp. MYb57: CLM74_14905
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Entry
CLM74_14905 CDS
T05384
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stem03016
]
CLM74_14905
Enzymes [BR:
stem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLM74_14905
Transfer RNA biogenesis [BR:
stem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLM74_14905
Prokaryotic type
CLM74_14905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AVJ33966
LinkDB
All DBs
Position
complement(3232312..3233220)
Genome browser
AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKPTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLLERPVPVISAEALQAAIAPLLGDILQ
RAPIYSALKQGGEPLYVKARRGDAIEAPERQVKVHAIEILEQHPERLWLRVTCGSGTYIR
SLARDLGETLGCGAHISALRRLWVEPFHEPAMVTLEQLRALVEAQDEAAMDALLLPLAAG
LSEYPRVDLDAEQTQRFCVGQRQRDLSWPRGLVAVFGPGSVAQGLGQVDDSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagccgaccggc
atgagctccaacgccgcgctgcaggtcgcccgtcgcctgttccgtgcagagaagggcggc
cacaccggcagcctcgacccgctggccaccggcctgttgccgctgtgcttcggcgaggcg
accaagattgccggcctgctgctgggctcggccaaggcctacgacgccgagatcgtgctg
ggccagaccaccgataccgacgacgccgagggccaggtgctgctcgagcggccggtgccc
gtgatcagcgccgaggccctgcaggcggcgatcgcgccgctgcttggcgacatcctgcag
cgtgcgccgatctattccgcgctcaagcagggcggggagccgctgtatgtgaaggcccgc
cgtggcgacgccatcgaggcgcccgagcgccaggtcaaggtccacgccatcgagattctg
gagcagcaccccgagcggctgtggctgcgggtcacctgcggctcgggcacctatatccgc
agtctggcccgtgacctgggtgaaacgctgggctgtggcgcgcacatcagcgccctgcgg
cgcctgtgggtggaaccgttccacgaaccggcgatggtcaccctggagcagctgagggct
ctggtggaagcgcaggatgaggccgccatggacgcgctgctgctgccgctggcggcgggc
ctgtccgaatacccccgggttgacctggacgccgagcagacccagcgcttctgcgtgggc
cagcgccagcgcgacctctcctggccgcgcggcctggtggcggtgtttggccctggatcg
gtggcgcagggcctgggccaggtcgacgatagcggtctgctggccccgcagcgccgcttc
aacctctga
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