Stenotrophomonas sp. MYb57: CLM74_15185
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Entry
CLM74_15185 CDS
T05384
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stem03009
]
CLM74_15185
Enzymes [BR:
stem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLM74_15185
Ribosome biogenesis [BR:
stem03009
]
Prokaryotic type
ribosomal protein modification factors
CLM74_15185
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AVJ34018
LinkDB
All DBs
Position
complement(3294874..3296235)
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AA seq
453 aa
AA seq
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MPQLNPKVGFVSLGCPKALVDSERILTQLRSEGYDIVPSYDSADVVVVNTCGFIDSAVTE
SLDAIGEAMNQNGKVIVTGCLGKRPEQIREAYPNVLAVSGPQDYQSVMEAVHAALPPKHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHHCSFCIIPSMRGKLVSRPVDEVLREAERLVR
GGVRELLVVSQDTSAYGVDVKYAEKMWRDKAYQTRLKALCEGLSELDAWVRMHYVYPYPH
VDDVVPLMAENRILPYLDIPFQHASPRILRLMKRPGAVEKTLERVQNWRRIAPDITVRST
FIVGFPGETEAEFEELLSFLDEAQLDRVGAFAYSPVEGATANNLPDPVPEEVKQERLARF
MEKQAQISASRLEAKIGTVQQCLVDAIEGDIAVARSKADAPEIDGLVHIQNADQVALRVG
EFVDVEITESDEHDLYGDALPPTTRPAFDLKVL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggccctcgtc
gattccgagcgcatcctcacccagctgcggtcggaaggctacgacatcgtcccgtcctac
gattcggccgacgtggtggtggtcaacacctgtggcttcatcgattcggcggtgaccgaa
tcgctggatgccatcggcgaggcgatgaaccagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgcccggagcagatccgcgaggcgtacccgaacgtgctggcggtgtccggg
ccgcaggattaccagagcgtgatggaagcggtgcatgcggcgctgccgcccaagcacgac
ccgttcgtggatctggtgccggactacggcatcaagctgaccccgcgccactacgcatac
ctgaagatttccgaaggctgcaaccaccactgcagcttctgcatcattccgtcgatgcgc
ggcaagctggtctcgcgtcccgtggacgaggtgctgcgcgaagccgagcgcctggtgcgc
ggcggtgtgcgcgaactgctggtggtttcgcaggacacctctgcctacggcgtggatgtg
aagtacgccgagaagatgtggcgcgacaaggcctaccagacccgcctgaaggcactgtgc
gaaggcctgtccgaactggatgcgtgggtgcgcatgcactacgtctatccgtatccgcac
gtcgatgacgtggtgccgctgatggccgagaaccggatcctgccgtacctggacatcccg
ttccagcacgccagcccgcgcatcctgcgcctgatgaagcgccccggcgcggtcgagaag
accctggagcgggtgcagaactggcgccgcatcgcgccggacatcaccgtgcgttcgacc
ttcatcgtcggtttcccgggcgagaccgaggccgagttcgaagagctgctgtccttcctg
gacgaagcgcagctggaccgcgtcggtgcgttcgcctactcgccggtggagggcgctacg
gccaacaacctgccggacccggtgccggaagaagtgaagcaggaacgactggcgcgcttc
atggagaagcaggcgcagatttcggcttcgcgtctggaagccaagatcggcacggtgcag
caatgcctggtcgatgccatcgaaggcgatatcgcggtggcccgttccaaggccgatgcg
ccggagatcgacggcctggtgcatatccagaacgcagaccaggtggcgttgcgcgtgggt
gagttcgtcgacgtggaaatcaccgagagcgacgagcacgatctctacggcgacgcactg
ccgccgaccacgcgcccggcattcgacctcaaggtgctgtga
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