Stenotrophomonas sp. MYb57: CLM74_15315
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Entry
CLM74_15315 CDS
T05384
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
stem
Stenotrophomonas sp. MYb57
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
VpsR
HTH_28
AAA_2
HTH_38
HTH_7
AAA
HTH_17
HTH_23
AAA_3
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AVJ34043
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Position
3334682..3336034
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AA seq
450 aa
AA seq
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MAASLEIPSRCAIWFGQPQAAERGALAAAGWQLRCVSPAPAMAIGLRGRDHLVAIVDLRH
LDADAVQLLLPWIERHHHLPWLAVLPPGLGSAPPAWGPLLRACRDQFALPLELHDLLSAM
QRQSEGDDALPHMVRESGNLPALIGDSTALLSVRASLHKFAPVDLPVLVTGETGTGKELA
AQALHALSGRAGKPFLAINCGAIPANLVQSELFGHERGAFTGAAQRRIGLFESAHGGTVF
LDEVGDLPADAQTSLLRVLQEGTLERVGSNQPLRVDVRVLAATHVELEQAVAQGHFRRDL
YYRLNVLRLPMPALRERGSDVLLLAEHFLRGFRQRHPGRARGFDPGARQAMRGFDWPGNV
RELLNRVQRAAIVAEGELINAADLDLAEPDAPARRALLQDARGQVERDVLLQALRQHGYN
VSACARHMQISRVTIYRLCRKHHLELPAQR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaagcctggagattccatcgcgttgcgcaatctggttcggccaaccgcaggca
gccgagcgtggtgcgctggcggcggccggttggcaactgcgctgcgtcagccctgcccct
gccatggccatcggcctgcgcggccgcgaccacctggtggccatcgtcgatctgcgtcac
cttgatgccgacgccgtgcagctgctgctgccatggatcgagcggcatcaccacctgccc
tggctcgccgtgctgccccctggactgggcagcgctccgcccgcgtgggggccgctgctg
cgcgcgtgccgcgaccagttcgcgctgccgctggaactgcacgatctgctgtcggcaatg
cagcggcaatccgagggcgacgacgcgttgccgcacatggtccgcgagtccggcaacctg
ccggcgctgatcggcgacagcaccgccctgctgtcggtgcgcgcctccctgcataaattc
gctccggtcgacctgccggtgctggtcaccggcgagaccggcaccggcaaggagctggcc
gcacaggcgctgcatgccttgtccgggcgcgccggcaaaccgttcctggcgatcaactgc
ggcgcgatccctgccaatctggtgcagtccgaactgttcggccacgagcgtggggccttc
accggtgccgcccaacgccgcatcggtctgtttgaaagtgcccacggcggcaccgtgttc
ctcgatgaagtcggcgacctgcccgccgacgcacagaccagcctgctgcgggtgctgcag
gaggggacgctggaacgggtcggcagcaaccagccgctgcgtgtggacgtgcgcgtactg
gcagccacccacgtcgaactcgaacaggcggtggcccagggccacttccgccgggacctt
tactaccgcctcaatgttctgcgcttgccgatgcccgcgctacgcgaacgtggcagcgat
gtcctgctgttggccgagcacttcctgcgcggcttccgccagcgccaccccggccgcgca
cgcgggtttgatcccggtgcacgccaggccatgcgcgggttcgactggcccggcaacgta
cgtgagttgttgaaccgcgtgcagcgggcagcgatcgtggccgaaggcgagctgatcaac
gccgctgacctggacctggcagagccggacgcccctgcgcggcgcgcgctgctgcaggat
gcgcgtggccaggtggagcgcgatgtactgctgcaggccctgcgccagcatggctacaac
gtgtcggcgtgtgcgcggcacatgcagatctcgcgggtcacgatataccggttgtgccgc
aagcatcatctggaactgccggcgcagcgctga
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