Stenotrophomonas sp. MYb57: CLM74_15410
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Entry
CLM74_15410 CDS
T05384
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stem03019
]
CLM74_15410
03009 Ribosome biogenesis [BR:
stem03009
]
CLM74_15410
Messenger RNA biogenesis [BR:
stem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLM74_15410
Ribosome biogenesis [BR:
stem03009
]
Prokaryotic type
rRNA processing factors
CLM74_15410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TLP1_add_C
CHP02642
DnaJ_CXXCXGXG
Anti-TRAP
DUF5351
Pox_A_type_inc
Motif
Other DBs
NCBI-ProteinID:
AVJ34062
LinkDB
All DBs
Position
complement(3356780..3358267)
Genome browser
AA seq
495 aa
AA seq
DB search
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
GLERAAFLHANDVVRPAPVASADTENTTLPPPSSVPIVELLRDGQDIVVQVVKDPIGTKG
ARLTTQISIPSRYMVLLPQSKVVGVSARIEDEGERARLKALVTELSAQHGGYGYIVRTNA
EGQPAEAIAEDIAYLSRVWNVVERRGREAASCSNIYEDLSLPLRSVRDLIRKDVDKVKVD
SKETFAQLQAFVAKYMPVLAEKIELYSGDRPIFDMFGVEDEIGRALDKQVPLKSGGYLVI
DQTEAMTTIDVNTGSFLGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDA
EHRRQVLRTLEKALARDHAKTTVYDFSPLGLVEMTRKRTVESLERQLSETCPQCSGRGTI
KTTETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESTAVAELEEFLGKSIRFQ
ADEQYLQEQFDVVLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaaatcctggtcaatgtgaccccgcgcgaaacccgggtcgcggtgatcgag
aacggcatgctgcaggaactgcacatcgagcgcggttggcgccggggtgtggtcggcaac
atctacaagggcaaggtgcagcgggtcatgccgggcatgcaggccgcatttgtcgaagtg
ggcctggagcgcgccgcgttcctgcacgccaacgacgtggtgcggccggcgccggtggcc
agcgccgataccgagaacacgaccctgccgccgccgtccagcgtgccgatcgtggagctg
ctgcgcgacggccaggacatcgtggtgcaggtggtgaaggatccgatcgggaccaagggc
gcacgcctgaccacccagatcagcattccctcgcgctacatggtgctgctgccgcagtcg
aaggtggtgggcgtgtcggcgcgcatcgaggacgaaggcgagcgcgcgcggctgaaagcg
ctggtgaccgaactgtcggcccagcacggcggctacggctacatcgtgcgcaccaatgcc
gagggccagccggccgaggccatcgccgaagacatcgcctacctgtcacgggtgtggaac
gtggtcgagcgccgcggccgcgaggcggcgtcgtgcagcaacatctatgaagacctgagc
ctgccgctgcgttcggtgcgcgacctgatccgcaaggacgtggacaaggtcaaggtggac
tcgaaggagaccttcgcccagctgcaggcgttcgtggccaagtacatgccggtgctggcg
gagaagatcgagctgtacagcggcgatcgtccgatcttcgacatgttcggggtcgaggac
gagatcggccgtgcgctggacaagcaggtaccgctgaaatccggtggctacctggtgatc
gaccagaccgaggcgatgaccaccatcgacgtcaataccggctcgttcctcggccagcgc
aacctggaagagacggtgttccgcaccaacctggaggccgcgcaggcggtggccaggcag
ctgcgcctgcgcaacctgggcggcatcatcatcatcgacttcatcgacatggatgacgcc
gaacatcgccgccaggtactgcgtaccctggaaaaggcgctggcccgcgaccatgccaag
accacggtgtacgacttctcgccgctgggcctggtggagatgacccgcaagcgcacggtg
gaaagcctggagcgccagctgtcggaaacctgcccgcagtgcagtggccgcggcaccatc
aagaccaccgaaacggtgacctacgagatcttccgcgagatcacccgcgcggtgcgccag
ttcgatgccgcgcgcctgctggtcatcgcgtccagcaaggtggtggcgcggatcaccgat
gaggaatccacggccgtggccgagctggaggagttcctcggcaagagcatccgcttccag
gcggacgagcagtacctgcaggagcagttcgatgttgttctgctctga
DBGET
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