Stenotrophomonas sp. MYb57: CLM74_15465
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Entry
CLM74_15465 CDS
T05384
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03030
DNA replication
stem03430
Mismatch repair
stem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM74_15465
03430 Mismatch repair
CLM74_15465
03440 Homologous recombination
CLM74_15465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stem03032
]
CLM74_15465
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_15465
Enzymes [BR:
stem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM74_15465
DNA replication proteins [BR:
stem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLM74_15465
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLM74_15465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
AVJ34072
LinkDB
All DBs
Position
complement(3368088..3369125)
Genome browser
AA seq
345 aa
AA seq
DB search
MELRPEQLAGQGADTALAPVYLIAGPETLRVLEAADAVRARARAAGIDEREVFDADGRDF
DWNQLDASFNAPSLFSARRLVEVRLPSGKPGKDGGEVISRFCANPAPDVILMITANEWSK
AHQGKWAEAVNRVGVLSVAWAIKPHELSDWIERRLRSRGLRAEPAAVQRLAERVEGNLLA
AAQEIDKLVLLADGQTLDVERMESLVADAARYDVFRLVEATFSGQPQAVLRMLAGLRGEG
EAVAALMPIVIRELLAGAGLARVQARGGNLAAEMKSRGIWESRQAPYKRALQRHPEGKRW
ERFVAEAGLVDRIAKGRADGDAWLALERLLVAVAEARAVRLLARA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgaccggaacagctggccggacagggcgctgacacggcgctggcgccggtc
tacctgatcgccggtccggaaacgctgcgtgtgctggaggcagctgatgccgtacgtgcc
cgtgcacgtgcggccggcatcgacgagcgcgaagtgttcgatgccgatggccgtgatttc
gactggaaccagctcgacgccagcttcaatgcccccagtctgttcagtgcccgccgcctg
gtggaagtgcgcctgcccagcggcaagccgggcaaggacggcggtgaggtgatcagccgg
ttctgcgccaacccggcgccggacgtgatcctgatgatcaccgccaacgaatggagcaag
gcccaccagggcaaatgggccgaggcggtgaaccgcgtcggcgtgctgtcggtggcctgg
gccatcaagccgcatgagctgtcggactggatcgaacggcgcctgcgcagcaggggcctg
cgcgccgaaccggcggccgtgcagcgcttggccgaacgcgtggaaggcaacctgctggcg
gctgcgcaggagatcgacaagctcgtattgctggccgacggccagaccctggacgtggaa
cggatggaatcgctggtggccgatgctgcccgctacgacgtgttccggctggtggaagcc
accttctccggccagccccaggcggtactgaggatgctggccgggttgcgcggcgaaggc
gaggccgtggccgcgctgatgccgatcgtgatccgcgagctgttggccggtgccggcctg
gcacgggtacaggcacgtggcggcaatctggcggcggagatgaaatcccggggtatctgg
gaatcgcggcaggcgccctacaagcgcgcgctgcagcggcacccggaaggcaagcgctgg
gagcgtttcgtggccgaagcagggctggttgaccgcatcgccaagggccgcgcagacggc
gatgcctggcttgcacttgagcgcctgctggtggcggtggccgaagcgcgtgcggtgcgg
ctgctcgcccgggcctga
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