KEGG   Stenotrophomonas sp. MYb57: CLM74_15715
Entry
CLM74_15715       CDS       T05384                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
stem  Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:stem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stem03400]
    CLM74_15715
Enzymes [BR:stem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLM74_15715
    5.6.2.6  RNA 3'-5' helicase
     CLM74_15715
DNA repair and recombination proteins [BR:stem03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CLM74_15715
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AVJ34115
LinkDB
Position
3421114..3423573
AA seq 819 aa
MKRSDALQRLHEWFGSRGWRPLPFQRAMWRHYLAGESGLLHTPTGSGKTLAMFGGPLLQA
MLDPPPVPRRASAVRPLQVLWVTPLRALASDTARALQAPIDGLGLGWRVGLRSGDASNRD
RRLAREGRIDVLVTTPESLALLLSYPDTLERMRQLRCVVVDEWHELLGNKRGVLLQLNLA
LLREAAPAMQLWGLSATLGNLPQARDVLLPHRPQATIVEGARQRPVTIRSLLPEPGERFP
WAGHLGLSQLPRVLDALFRARSSLLFTNTRAQAELWHQALAAVWPEDAGTLALHHGSLDP
TLRQQVEDGLRAGTLRCVVATSSLDLGVDFPEVDQVLQLGSPKGVARLRQRAGRARHRPG
ASGQILCIPSHALELAEYAAARHALHDGVIEARRPPTLSLDVLAQHAVSRALAGGFNADA
LLEQVRGTHAFAALEDAQWNAVIDFIVQGGRALSRYPEFHKVVRDADGVYRMPDRRQALR
HRLSIGTISSDGSVRVQFLRGGSLGAVEEQFASRLRRGDRFQFAGRLLELVQLRDMTAFV
RVARGGGDGVVPRWQGGQLPLSMPLGRELEKVLSGADQSAESRWLAPLLALQSQLSAAPS
PDHLLVEDVRRPEGQFLFVYPFAGRHVHEALAALLALRCTRRQRNSIGYAVNDHGLVLAP
ATPVDLQEQDWRAMLDAGDLLQDLREAVNLGELARRQFRGIARVAGLLVPSLPGGMPRSL
RQLQASAGLLHDVLREHDPEHLLLALAEQEVLHDSLDLPGLQQVLARIATRSLSLQRPSS
LTPLAFPLWAERLRGQFSNEDWRTRVQRAAQQLERRHGR
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaagcgcagcgatgcgctgcagcgcctgcacgagtggttcggcagccgcggctggcgc
cccctgcccttccagcgcgcgatgtggcgtcactatctggcgggcgaatcgggcctgctg
cacaccccaaccggcagcggcaaaactcttgccatgttcggcggccccttgttgcaggcg
atgctcgacccgccccccgtaccgcgtcgcgccagcgcggtgcgcccgctgcaggtgctg
tgggtgacaccgctgcgggcgctggccagcgataccgcacgcgcgctgcaggcgccgatc
gacggcctgggcctgggctggcgcgtggggctgcgcagcggcgatgccagcaaccgcgac
aggcgcctggcccgcgaaggtcgcatcgacgtgctggtcaccacgccggagtcgctggcg
ctgctgctcagctatcccgatacccttgagcgcatgcgccaactgcgctgcgtggtggtg
gacgaatggcacgaactgctgggcaacaagcgcggcgtgctgctgcagttgaatctggcg
ctgctgcgtgaggcagccccggcgatgcagctgtgggggctgtcggccacattgggcaac
ctgccacaggcacgcgacgtactgctgccacaccgtccacaggcaacgatcgtggaaggt
gcacggcagcggccggtgacgatccgcagcctgctgcccgaacccggcgaacgctttcca
tgggccgggcatcttggcctttcccagcttccgcgcgtgctcgacgcgctgttccgtgca
cgcagcagcctgctcttcaccaatacccgtgcgcaggcggaactgtggcaccaggccctc
gcagccgtgtggccggaagatgccggcacgctcgccctgcaccatggatcattggatccc
acgctgcgacagcaggtcgaggacggactgcgtgcgggcacgctgcgctgcgtggtggca
acctccagcctggatctgggcgtggactttccggaagtggaccaggtgctgcagctgggc
agcccgaagggcgtggcgcgcctgcgccagcgcgccgggcgtgcgcgccatcggcccggt
gccagcggccagatactgtgcattcccagccatgcgctggaactggccgagtacgcggcg
gcccggcacgcgttgcatgacggggtgatcgaagcgcgacgtcctcccacgttgtcgctg
gacgtattggcccagcacgccgtcagccgcgcgctggcgggcggcttcaacgccgatgca
ctgctggaacaggtccgtggcacgcatgccttcgccgcgctggaggacgcacagtggaat
gcggtgatcgatttcatcgtgcagggcggacgtgcattgtcccggtacccggagttccat
aaggtggtacgcgatgccgacggcgtgtaccgcatgcccgatcgccgccaggcgctgcgc
catcggctgtcgatcgggaccatcagcagcgacggcagcgtgcgcgtacagttcctgcgt
ggcggcagcctgggcgcggtggaagagcagttcgccagccgcctgcgccgcggcgaccgt
ttccagtttgcggggcggctgctggagctggtgcagctgcgcgacatgaccgcgttcgtg
cgcgtggcgcgcggtggtggtgatggcgtggtaccgcgctggcagggcggtcaactgcca
ctgtcgatgcccttgggccgcgaactggaaaaggtgctgtcaggcgccgaccagagcgcg
gagtcgcggtggcttgcgccgctgctggcattgcagtcgcagctgtctgcggcgccatcg
cccgaccacctgctggtggaagacgtgcgccgacccgaaggccagttcctgttcgtctat
ccctttgcgggccgccatgtgcacgaagcgctggccgcgctgctggcccttcgctgcacc
cgtcggcaacgcaacagcatcggctatgcagtgaatgaccatggcctggtgctcgctccg
gccacgccggtggatctgcaggaacaggactggcgggcaatgctggatgctggcgatctg
ctgcaggacctgcgcgaagcagtgaacctgggcgagctggcgcgccgccagttccgcggc
atcgcgcgcgtggcgggcctgctggtacccagcctgccgggtggcatgccgcgctcgctg
cgccaactgcaggcctccgccggactgctgcatgacgtgctgcgcgagcacgatccggag
catctgctgctggcattggccgagcaggaagtactgcacgacagcctcgacctgcccggg
ttgcagcaggtgctggcacgcatcgccacacgttcgttgtccctacagcggccctcatca
ctgaccccgctggcatttcccttgtgggccgaacgcctgcgtgggcagttcagcaatgaa
gactggcgcacgcgcgtgcagcgtgccgcgcagcagctggagcgccgccatggccgctga

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