Stenotrophomonas sp. MYb57: CLM74_15790
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Entry
CLM74_15790 CDS
T05384
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stem03019
]
CLM74_15790
03009 Ribosome biogenesis [BR:
stem03009
]
CLM74_15790
03036 Chromosome and associated proteins [BR:
stem03036
]
CLM74_15790
Enzymes [BR:
stem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CLM74_15790
Messenger RNA biogenesis [BR:
stem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLM74_15790
Ribosome biogenesis [BR:
stem03009
]
Eukaryotic type
90S particles
RNase
CLM74_15790
Prokaryotic type
rRNA processing factors
CLM74_15790
Chromosome and associated proteins [BR:
stem03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CLM74_15790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AVJ34127
LinkDB
All DBs
Position
complement(3435536..3436216)
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AA seq
226 aa
AA seq
DB search
MPNKSFQREDLIGHAFRDPDLLKQALTHRSAGAPHNERLEFLGDSIVNMMVAEALYLRWP
KADEGAMTRARAELVREGALAVIARTLQLGDRLTMGPGEMKSGGHRRDSTLADAFEAVVA
AIYLDVGFEACRAMVLPWFAASMEALPATGRPEKDPKTRLQEWLQGRQKALPQYELVSES
GDDHAKHFRVRCNVADPAASTEGEGSSRRIAEQQAAAAVLEQLDSK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaataaatctttccaacgtgaagacctgatcggtcacgccttccgcgacccagac
ctgctcaagcaggcgctgacccatcgcagtgccggcgcgccgcataacgagcggctggag
ttccttggcgacagcatcgtcaacatgatggttgccgaggcgttgtacctgcgctggccc
aaggcggacgaaggcgcgatgacccgcgcccgcgccgagctggtccgcgagggtgcgctg
gcggtgatcgcgcggaccctgcagctgggtgaccggctgacgatgggccccggcgaaatg
aagtccggcggccatcgccgcgactcgaccctggccgatgcgttcgaggccgtggttgct
gcgatctacctggacgtgggttttgaagcctgccgggcgatggtcctgccctggtttgcc
gcctcgatggaggcgctgccggccaccgggcgaccggagaaggaccccaagacccgcctg
caggaatggctgcagggccgacagaaggcgttgccacagtacgaactggtgtcagaatcc
ggtgacgaccacgccaaacacttccgggtacgctgcaacgtagccgaccccgccgccagc
accgagggcgaaggctcctcgcggcggattgccgaacaacaagcggctgcggccgtcctt
gaacaactggattccaagtga
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