Stenotrophomonas sp. MYb57: CLM74_15825
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Entry
CLM74_15825 CDS
T05384
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00071
Fatty acid degradation
stem00280
Valine, leucine and isoleucine degradation
stem00310
Lysine degradation
stem00362
Benzoate degradation
stem00380
Tryptophan metabolism
stem00410
beta-Alanine metabolism
stem00640
Propanoate metabolism
stem00650
Butanoate metabolism
stem00907
Pinene, camphor and geraniol degradation
stem00930
Caprolactam degradation
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01120
Microbial metabolism in diverse environments
stem01200
Carbon metabolism
stem01212
Fatty acid metabolism
Module
stem_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CLM74_15825
00650 Butanoate metabolism
CLM74_15825
09103 Lipid metabolism
00071 Fatty acid degradation
CLM74_15825
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CLM74_15825
00310 Lysine degradation
CLM74_15825
00380 Tryptophan metabolism
CLM74_15825
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CLM74_15825
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CLM74_15825
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CLM74_15825
00930 Caprolactam degradation
CLM74_15825
Enzymes [BR:
stem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CLM74_15825
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CLM74_15825
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CLM74_15825
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
MORN
ApbA
AlaDh_PNT_C
UDPG_MGDP_dh_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AVJ34134
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Position
3442794..3444857
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AA seq
687 aa
AA seq
DB search
MLSSFDGLRFSHWHPEIRDDGVVVLSLDRQDSSVNAMSQDVLLELGDLLERIAMDPPKGV
VIQSLKKAGFIAGADLKEFQEFDRRGTVNDAIRRGQSTYQKLAELPCPTVAAIHGHCLGG
GTELALACRYRVASNDSSTRIGLPETQLGIFPGWGGSARLPQLVGAPAAMDMMLTGRTLS
ASAARGIGLVDKVVAPAVVLDTAVALALSGTTRPFKQRALAWATNTWPARQLLAPQMVKQ
VARKAKKDQYPAPYALISTWQRSGGKPVQARLDAERRAVVKLASTPTARNLIRIFFLTER
LKGLGGGDSGIRHVHVVGAGVMGGDIAAWAAYKGFEVTLQDREQRFIDPAMERAQALFAK
KVRDESKRPAVAARLRADLEGNGVAQADLVIEAIIENPEAKRALYQTLEPKMKLDALLTT
NTSSIPLVELRDHIQRPAQFAGLHYFNPVAQMPLVEIIHHDGMAAETERRLAAFCKALGK
FPVPVAGTPGFLVNRVLFPYMLEAATAYAEGIPGPVIDKAAVKFGMPMGPIELIDTVGLD
VAAGVGKELAPFLGLQIPAALQTVEPDKRGKKDGQGIYTWENGRAKKPDVARDYQAPADL
EDRLILPLLNEAVACLHEGVVADADLLDAGVIFGTGFAPFRGGPIQHIRAVGADAIVERL
KALQQRHGDRFAPRPGWDNPVLREPVV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaagcttcgatggtctccgcttcagccactggcaccccgagatccgcgacgat
ggcgtggtggtcctctctctggatcgtcaggacagcagtgtcaacgcaatgtcgcaggat
gtgctgctggagctgggcgacctgctggagcgcatcgccatggacccaccgaagggcgtg
gtgatccagtccctcaagaaggcaggcttcatcgccggtgccgacctgaaggagttccag
gagttcgatcgccgcggcaccgtcaacgacgccatccgccgcggccagtcgacctaccag
aagctggcagagctgccctgcccgaccgtggccgccatccatggccattgcctgggcggc
ggtaccgagctggccctggcctgccgttatcgcgttgcatccaatgacagttccacccgc
atcggcctgccggaaacccagctgggcatcttcccgggctggggcggcagcgcgcgcctg
ccgcagctggtcggcgcgccagcggcaatggacatgatgctgaccggacgcacgctgtcg
gcctcggccgcacgcggcatcgggctggtcgacaaggtggtggcaccggccgtcgtgctc
gataccgccgtggcgctggcactgtccggcaccacccgcccgttcaagcagcgtgcgctg
gcctgggcgaccaatacctggccggcacgccagctgctggccccgcagatggtcaagcag
gtcgcacgcaaggcgaagaaggaccagtacccggcgccgtatgcgttgatcagcacctgg
cagcgcagcggcggcaagccggtgcaggcacgcctggatgccgaacgacgcgccgtagtg
aagctggccagcacgccgaccgcgcgcaacctgatccgcatcttcttcctcaccgaacgc
ctgaagggcctgggcggtggcgattccggcatccgccacgtgcacgtggtcggtgccggc
gtgatgggcggtgacattgctgcgtgggccgcctacaagggttttgaagtgaccctgcag
gaccgcgagcagcgcttcatcgacccggccatggaacgtgcacaggcactgttcgccaag
aaggtgcgtgacgagagcaagcgcccggccgtcgccgcgcgcctgcgtgcggacctggaa
ggcaatggcgtggcgcaggccgatctggtcattgaagcgatcatcgagaacccggaagcc
aagcgtgcgctgtaccagacgctggagccgaagatgaagctcgacgcgttgctgaccacc
aacacctcgtcgattccgctggtggagctgcgcgatcacatccagcgcccggcgcagttc
gccggcctgcattacttcaacccggtggcacagatgccgttggtggagatcatccatcac
gacggcatggcggccgaaaccgagcgtcgcctggcagccttctgcaaggcgctgggcaag
ttcccggtgccggtggccggcacgcccggtttcctggtcaaccgcgtgctgttcccgtac
atgctggaagcggccaccgcatacgctgaaggcattccgggcccggtgatcgacaaggcg
gcggtgaagttcggcatgccgatgggcccgatcgaactgatcgacaccgtaggcctggac
gtggccgctggcgtgggcaaggaactggccccgttcctgggcctgcagattccggcggcg
ctgcagacggtggaaccggacaagcgcggcaagaaggatggccagggcatctacacctgg
gagaacggccgggccaagaagccggacgtggcgcgcgactatcaggcgcctgccgatctg
gaagatcgcctgatcctgccgttgttgaacgaggcggtggcctgcctgcacgaaggcgtg
gtggccgacgcggacctgctggatgcgggcgtgatcttcggtaccggtttcgcaccgttc
cgcggcggtccgatccagcacatccgtgcggtgggtgccgatgccatcgtggagcgcctg
aaggcgctgcagcagcgtcacggtgatcgcttcgcaccgcgcccgggctgggacaacccg
gtactgcgcgaaccggtggtttga
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