Stenotrophomonas sp. MYb57: CLM74_15930
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Entry
CLM74_15930 CDS
T05384
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00260
Glycine, serine and threonine metabolism
stem00630
Glyoxylate and dicarboxylate metabolism
stem00670
One carbon pool by folate
stem00785
Lipoic acid metabolism
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01200
Carbon metabolism
Module
stem_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CLM74_15930 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLM74_15930 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CLM74_15930 (gcvP)
00670 One carbon pool by folate
CLM74_15930 (gcvP)
Enzymes [BR:
stem01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CLM74_15930 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AVJ34154
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Position
3467227..3470094
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AA seq
955 aa
AA seq
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MSQNTPSLRELEHHSAFVERHIGPNDAEIAQMLGVIGHASLDAMTDAIVPAKIKSPAPLA
LPESITEVQALAKIRAIADKNTVLRSFIGQGYYGTHTPNVILRNILENPAWYTAYTPYQA
EISQGRMEALINFQTLCADLTGMEIANASLLDEATAAAEAMTLAKRSAKSKSDTFFVHDA
VHPQTLELLRTRAEPMGIVLRVGTPAEALEAEAFGLLLQYPDTFGQVGDYKALVDAVHAR
GGLVAVATDLLALTLLAAPGEWGADIVVGNSQRFGVPFGFGGPHAAFMACRDAYKRSMPG
RLIGVSIDAQGNPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLTR
IARRTHRLAAILASALRTAGVQVGADFFDTLHITGVDADAIHAKARAAGYNLRAIDSSSV
GISLDETATRADIVAVGALFGATVDVDALDASTADALPAGLLRQSAFLTHPVFNTHHSEH
ELLRYLRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFSQIHPLVPAEQALGYK
ELIDSLEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEDHRDICLIPDSAHG
TNPASAQMCGMKVVVTKTDANGNVDVEDIRLNAEKYSDRLAAIMMTYPSTHGVFEEEVVE
ICEIIHKHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKTFCIPHGGGGPGVGPCAV
KSHLAPFLPGKLGDNGPVGMVSAASFGSASILPISWMYIAMMGTEGLRKATQVAQLNANY
IAKRLAPHFKTLYTGRNGLVAHECILDVRPLEKTSGIGAEDVAKRLIDFGFHAPTLSFPV
AGTLMVEPTESESLHELDRFIDAMIQIREEITAIEDGRLDREDNPLKNAPHTATAVTASE
WTHAYPRELAAFPLPSLKLQKYWPPVARVDNVYGDKNVMCACIPVDAYKDDEVEA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaacaccccttccctgcgtgagctcgagcaccattcggcgttcgtcgagcgc
cacatcggccccaacgatgccgagatcgcgcagatgctcggcgtcatcggccacgcatcg
ctggatgcgatgaccgatgccatcgtgccggccaagatcaagtcgccggcaccgctggcg
ctgccggagtcgatcaccgaagtgcaggcgctggcgaagatccgcgcgatcgccgacaag
aacaccgtgctgcgcagcttcatcggccagggctactacggtacccacacgccgaacgtg
atcctgcgcaacatcctggaaaacccggcctggtacaccgcctacaccccgtaccaggcg
gaaatctcgcagggccgcatggaagcgctgatcaacttccagaccctgtgcgccgacctg
accggcatggaaatcgccaacgcctcgctgctggacgaagccacggccgccgctgaagcg
atgaccctggccaagcgctcggccaagtcgaagtcggacaccttcttcgtgcacgacgcc
gtgcacccgcagacgctggaactgctgcgcacccgcgccgagcccatgggcatcgtgctg
cgcgtgggcaccccggccgaagcgctggaagcggaagccttcggcctgctgctgcagtac
ccggacaccttcggccaggtgggcgactacaaggcgctggtcgatgccgtgcacgcgcgc
ggcggcctggtggccgtggccaccgacctgctggcactgaccctgctggccgccccgggc
gaatggggtgcggacatcgtggtcggcaacagccagcgtttcggcgtgccgttcggcttc
ggtggcccgcatgctgcgttcatggcctgccgtgacgcctacaagcgttcgatgccgggc
cgcctgatcggcgtctcgatcgacgcacagggcaacccggcctaccgcctgaccctgcag
acccgcgaacagcacatccgccgcgagaaggccacctccaacatctgcaccgcacaggtg
ctgctggcggtgatggcctcgatgtatgccgtctaccacggcccggaaggcctgacccgc
atcgcccgccgcacccatcgcctggccgccatcctggccagcgcgctgcgcactgccggt
gtgcaggtcggtgccgacttcttcgacacgctgcacatcaccggtgtcgacgccgacgcg
atccatgccaaggcccgtgccgccggctacaacctgcgtgcgatcgacagcagttcggtc
ggcatcagcctggacgagaccgccacccgcgccgacatcgtcgccgtaggcgcgctgttc
ggtgccaccgttgatgtggacgcgctcgatgccagcaccgccgatgcgctgccggccggc
ctgctgcgccagtccgcgttcctgacccacccggtgttcaacacccaccacagcgagcac
gaactgctgcgctacctgcgttcgctggccgacaaggacctggcgatggaccgcacgatg
atcccgctgggctcgtgcaccatgaagctcaacgccaccgccgaaatgatcccggtgacc
tggccggagttctcgcagatccacccgctggtgccggccgagcaggcgctgggctacaag
gaactgatcgattcgctggaagcaatgctggtcgagtgcaccggctacgacgccgtcagc
ctgcagccgaactccggtgcgcagggcgagtacgccggcctgctggcgatccgcgcctac
caccgctcgcgtggcgaagatcaccgtgacatctgcctgatcccggattcggcgcatggc
accaacccggcctcggcgcagatgtgcggcatgaaggtcgtggtcaccaagaccgatgcc
aacggcaacgtcgacgtcgaagacatccgcctcaacgccgagaagtacagcgaccgcctg
gccgcgatcatgatgacctacccgtccacgcacggcgtgttcgaggaagaggtggtggag
atctgcgagatcatccacaagcatggcggccaggtgtacaccgacggtgccaacatgaac
gccctggtcggcgtggccaagccgggcaagtggggttcggacgtttcgcacctgaacctg
cacaagaccttctgcatcccgcacggcggcggcggcccgggcgttggcccgtgtgcggtc
aagtcgcaccttgccccgttcctgccgggcaagctgggtgacaacggtccggtcggcatg
gtcagcgccgccagcttcggcagcgcctcgatcctgccgatcagctggatgtacatcgcg
atgatgggcaccgaaggcctgcgcaaggccacccaggtcgcccagctcaacgccaactac
atcgccaagcgcctggccccgcacttcaagaccctgtacaccggtcgcaacggcctggtc
gcgcacgagtgcatcctggacgtgcgtccgctggagaagaccagcggcatcggtgccgaa
gacgtggccaagcgcctgatcgacttcggcttccatgccccgaccctgagcttcccggtg
gccggcacgctgatggtcgaaccgaccgaaagcgaatcgctgcacgagctggaccgcttc
atcgacgcgatgatccagatccgcgaagagatcaccgcgatcgaagacggccgcctggac
cgcgaggacaacccgctgaagaacgccccgcacacggccacggccgtgaccgccagcgag
tggacccacgcctacccgcgcgagctggccgccttcccgctgccgagcctgaagctgcag
aagtactggccgccggtagcccgcgtcgacaacgtgtacggcgacaagaacgtgatgtgt
gcctgcatcccggtcgatgcctacaaggatgatgaagtcgaggcgtaa
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