Stenotrophomonas sp. MYb57: CLM74_16440
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Entry
CLM74_16440 CDS
T05384
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00550
Peptidoglycan biosynthesis
stem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM74_16440 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stem01003
]
CLM74_16440 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stem01011
]
CLM74_16440 (mrcB)
Enzymes [BR:
stem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CLM74_16440 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLM74_16440 (mrcB)
Glycosyltransferases [BR:
stem01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CLM74_16440 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
stem01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CLM74_16440 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AVJ34253
LinkDB
All DBs
Position
complement(3595961..3598402)
Genome browser
AA seq
813 aa
AA seq
DB search
MPRRYDSDDIDDSDDDLQDDGSPLWRRRLITWTMAAVALGLGFLIPYTLYLNQQVTQRFG
ELRWQIPTRVYARPLVLMPGKAMDAATLKTELAASAYRDDGQGKDPATYAVQGGRFVISS
RGYNDVDGHVAARRVELSLSGGSIASLRDADSRKALKAARMDPARIATLYGQKQEERRLI
RMNEAPDLLVTGLQAVEDKDFNRHHGIDLSGIARAVWVTVRSGGQSRQGASTLTQQLARS
GLLGIGKEQTVTRKFNEVLYALIMEARYDKRTIFEAYLNQVYLGQRGSQAIHGMSSGAEF
WFGRDLSSLETEQIALLIGLVKGPSYYDPRRNPERALDRRNFVLGKLHEATLIDDAEYQR
ALKAPLGVPKTPGLVAANRFPAYVDLVRRQLAHDYPESALQGAGLSVMSGMSPSAQAYAE
GAVTRTIKSLESKRRPELQAGLVMTDVHNGDVVAVIGSREVSEVGFNRAIEAQRPVGSLL
KPFVYLLALAQPDRYSLASWVDDSPVTVQLSRGRNWNPGNADNRSHGTVRLIDALAHSYN
QATVRVGMQVGPERVTQLIHVLAGIKAEANPAVILGSTDQSPYAMAQLYQFLASGGEIQP
LHAVRGVLDPQGKLLKRYDKTPAPAQEGDSIAANLISIGLQQVVASGTAQRLNADGLGRL
QPAGKTGTTNDGRDSWYAGYTGDHLAVIWMGNDQNEQAGLYGATGAMRVWSGIFQRLPTA
PLKVSNKGLDWQPVAATGTNSTDEGCPGARRFPFVVGYAPAYEPCAPAALPDAQGGAEGE
GGGWRSWFGLDRKPEPAAEPAAAPAAATPPPSR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgacgctacgattccgacgacatcgacgattccgacgacgacctgcaggacgat
ggcagcccgctctggcggcgccgacttatcacctggaccatggctgcggtcgcgttggga
ttgggtttcctgatcccctatacgctgtacctgaaccagcaggtgacgcaacgcttcggt
gaactgcgctggcagatcccgacgcgcgtctacgcacgcccgctggtgctgatgcccggc
aaggcgatggatgcggcaaccctgaagaccgaactggccgcctcggcctatcgcgatgat
ggccagggcaaggatccggcaacctatgcggtgcagggcggccgcttcgtcatctccagc
cgcggctacaacgatgtcgatggccacgttgctgcgcgccgggtcgagctttcgctgtcc
ggcggcagcatcgcatcgttgcgggacgccgacagccgcaaggcgctgaaggcggcccgc
atggatcctgcgcgcatcgccacgctgtatggccagaagcaggaagagcgccgcctgatc
cgcatgaacgaggccccggacctgttggtcactggcctgcaggcggtcgaggacaaggac
ttcaaccgccatcacggcatcgatctgtccggtatcgcgcgcgcggtctgggtgactgtc
cgctccggtgggcagagccgccagggcgcttccaccctgacccagcagctggcccgcagc
ggcctgctgggaatcggcaaggaacagaccgtcacccgcaagttcaacgaggtgctgtac
gcgctgatcatggaagcgcgctatgacaagcgcaccatcttcgaggcgtacctcaaccag
gtgtatctgggccagcgcggcagccaggcgatccacggcatgtcctccggtgccgagttc
tggttcggccgcgatctctcctcgctggaaaccgagcagatcgcgctgctgatcggcctg
gtcaagggaccgtcctactacgacccgcggcgcaatcccgagcgcgcgctggaccgtcgc
aacttcgtgctgggcaaactgcacgaggcgaccctgatcgacgatgccgagtaccagcgt
gcgttgaaggcgccgctgggcgtgcccaagaccccgggcctggtggcagccaaccgcttc
ccggcctacgtcgacctggtgcgtcgccagcttgcccatgactatccggaatccgccctg
cagggcgctggcctgagcgtgatgagcggcatgtcgccgtccgcgcaggcttatgccgaa
ggtgcggtcacgcgcaccatcaagtcgctggaaagcaagcgtcgccccgagctgcaggcc
ggcctggtgatgaccgacgtgcacaacggtgacgtggtggcggtgatcggcagccgcgaa
gtgtccgaggtcggtttcaaccgcgccatcgaggcgcagcgcccggtcggttcgctgctc
aagccgttcgtgtacctgctggcactggctcagccggaccgctattcgctggccagctgg
gtcgatgattcaccggtgaccgtgcagctcagccgcggccgcaactggaaccccggcaat
gcggacaaccgcagccacggcaccgtgcgcctgatcgatgcgctcgcccactcctacaac
caggcgacggtacgggtgggcatgcaggtcggaccggaacgggtgacgcagctgatccac
gtgctggccggcatcaaggccgaggcgaacccggcggtgatcctcggctcgaccgaccag
agcccgtacgcgatggcgcagctgtaccagttcctggcatcgggcggcgagatccagccg
ctgcacgcggtgcgtggcgtccttgatccgcagggcaagctgctcaagcgctacgacaag
accccggcaccggcacaggaaggtgactcgattgccgccaacctgatcagcatcggcctg
cagcaggtggtggccagtggtaccgcgcagcgtttgaacgccgatggcctgggccgcctg
cagccggccggcaagaccggcaccaccaacgatggccgtgacagctggtatgccggttac
accggcgatcacctggcggtgatctggatgggcaatgaccagaacgaacaggccggcctg
tatggcgccaccggcgcgatgcgggtgtggtcgggcatcttccagcgcctgccgacggcg
ccgttgaaggtcagcaacaagggcctcgactggcagccggttgcggccacgggaaccaac
agcaccgatgaagggtgcccgggtgcccgccgcttcccgttcgtggtgggctatgcgcct
gcgtatgaaccgtgcgcaccggcggccttgccggatgcgcagggcggtgcggaaggcgag
ggcggcggctggcgcagctggttcggccttgaccgtaagcccgaacccgccgctgaacct
gccgcagcacccgctgcagcgactcctcctccaagccgatga
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