Stenotrophomonas sp. MYb57: CLM74_16795
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Entry
CLM74_16795 CDS
T05384
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00020
Citrate cycle (TCA cycle)
stem00640
Propanoate metabolism
stem00660
C5-Branched dibasic acid metabolism
stem00720
Other carbon fixation pathways
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01120
Microbial metabolism in diverse environments
stem01200
Carbon metabolism
Module
stem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
stem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CLM74_16795
00640 Propanoate metabolism
CLM74_16795
00660 C5-Branched dibasic acid metabolism
CLM74_16795
09102 Energy metabolism
00720 Other carbon fixation pathways
CLM74_16795
Enzymes [BR:
stem01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CLM74_16795
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AVJ34318
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All DBs
Position
complement(3681603..3682772)
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AA seq
389 aa
AA seq
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MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVAAANSLGQGPWMVKAQIHAGGRGKAGGV
KFCKTTDDVKAAAAKMLGTKMATYQTAGVELPVNLVLVTTAGEIVKELYLSVLVDRGTKT
ITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLTAKQAGQFANI
MVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKALVAMRDKTQEDP
TEVIASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIE
AFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQL
LRDSGMAIIPADNINDGAKKVVEAVKNAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccacgaataccagtcaaaacaactgcttgccgagtacggcatcccggtcccg
gccggcaaggtcgctgcgaccccggacgaagctgttgccgctgccaactccctgggccag
ggcccctggatggtcaaggcgcagatccacgctggcggccgcggcaaggctggcggcgtc
aagttctgcaagaccaccgacgacgtgaaggccgctgcggccaagatgctcggcaccaag
atggccacctaccagaccgctggcgttgaactgccggtcaacctggtgctggtgaccacc
gctggcgagatcgtcaaggaactgtacctgtcggtgctggttgaccgtggcaccaagacc
atcacctacatcgcttcttcggaaggcggcgtggagatcgagcaggtcgccgctgaaacc
ccggagctgatccactcgctgaacgtcgacttcgtcgaaggcgtgcagggttaccacggt
cgtgatttcggcttcaagctgggcctgaccgccaagcaggccggccagttcgccaacatc
atggtgaacctgtaccgcctgttcaacgaaaaggacctggcgctggttgaaatcaacccg
ctggccatcctggacgacggcaacctgtacgcgctggacggcaagttcgacagcgacgac
aacgccgcgttccgccagaaggccctggtcgccatgcgcgacaagacccaggaagatccg
accgaagtgatcgcttcggagctggacatcaactacgtcaccatggacggcaacatcggc
tgcatggtcaacggcgcaggcctggccatggccaccatggacgtcatcaagctcaacggc
ggcgagccggcgaacttcctcgacgtgggcggcggcgccaacaagcagcgcgtcatcgaa
gcgttcaagctgatcctgtcctcggacaaggtcgaaggcatcttcgtcaacatcttcggc
ggcatcgtccgctgcgacatgattgccgaaggcatcattgccgccgtgaaggaagtgggc
gtcaaggttccggtcgtggtgcgtctggaaggcaccaacgtggaagaaggcaagcagctg
ctgcgtgacagcggcatggccatcatcccggccgacaacatcaacgacggtgccaagaag
gtcgtcgaagctgtcaagaacgccgcctga
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