Stenotrophomonas sp. MYb57: CLM74_17505
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Entry
CLM74_17505 CDS
T05384
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00730
Thiamine metabolism
stem01100
Metabolic pathways
stem01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CLM74_17505
Enzymes [BR:
stem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CLM74_17505
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AVJ34450
LinkDB
All DBs
Position
complement(3842183..3844027)
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AA seq
614 aa
AA seq
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MNAQLSALQQQAQQLSESVTRPIPGSRKIHVPGSRPDLQVPMREIALTRTPTVFGGEENA
PVTVYDTSGPYTDPDVRIDLSAGLPALRRGWVEERNDTEQLDGLSSSFGRAREHDPKLDP
VRFPARSLPRRARAGANVTQMHYARRGIITPEMEFVAIRETQRLEAIRDAALLQQHPGEA
FGASIQQIITPEFVREEIARGRAVLPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVAIGTVPIYQALEKVDGRAEA
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTARRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEDICEIMKAYDVTFSLGDGLRPGCIADANDAAQFGELETLGELTKIAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYRIAAHAADLAKGHPGAQVRDNALSKARFEFRW
EDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVREYAEKGMQEKS
EQFRAAGAEVYQQG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacagctctccgccctgcagcaacaggcccagcaactctccgaatccgtgacc
cggcccattcccggctcgcgcaagatccacgtgcctggctcgcgcccggacctgcaggtg
ccgatgcgcgagatcgcgctgacccgcacgccgaccgtgttcggcggcgaagagaacgca
ccagtcaccgtctacgacacctccggcccgtacaccgatccggacgtgcgcatcgacctg
tccgcgggcctgccggcactgcggcgtggctgggtggaggagcgcaacgacaccgagcag
ctcgacggcctcagctcctcgttcggccgcgcgcgcgaacatgatccgaagctggacccg
gtgcgttttcccgcgcgcagcctgccacgtcgcgcgcgggccggcgccaacgtcacccag
atgcactatgcacgccgcggcatcatcaccccggaaatggaattcgtggcaatccgcgaa
acccagcggctggaagcgatccgcgatgccgcactgctgcagcagcatcctggcgaagcc
ttcggtgcgtcgatccagcagatcatcaccccggaattcgtgcgcgaggaaatcgcccgc
ggccgtgcggtgctgcccaacaacatcaatcacccggaaagcgagccgatgatcatcggc
cgcaacttcctgaccaagatcaacgccaacatcggcaacagcgcggtgtcctcgggcatt
gcagaggaagtggaaaagctggtgtgggcgatccgctggggcggcgacacggtgatggac
ctgtcaaccggcaagcacatccatgaaacgcgcgaatggatcatccgcaattcgccggtg
gcgatcggtacggtgccgatctaccaggcgctcgagaaggtcgacggccgcgccgaagcg
ctgacctgggagattttccgcgacaccctgatcgaacaggcagagcagggcgtggactac
ttcaccatccatgccggggtactgctgcgctatgtgccactcaccgccaggcgtgttacc
ggcatcgtcagccgcggcggttcgatcatggccaagtggtgcctggcccaccacaaggaa
aacttcctttacacccatttcgaagacatctgcgaaatcatgaaggcctacgacgtgacc
ttctcgctgggtgacggcctgcgtcctggctgcatcgccgatgccaacgatgcggcgcag
ttcggcgagctggagacgctgggcgagttgacgaagattgcgtggaagcacgacgtgcag
accatgatcgaaggccccggccatgtgccgatgcagctgatcaaggagaacatggacaag
cagctgcgcgagtgcggcgaggcgccgttctacacgcttggcccgctgaccaccgacatc
gcaccggggtacgaccacatcaccagcgcgatcggtgcggcgatgatcggttggttcggc
actgccatgctctgctacgtcacgccgaaggagcatctgggcctgcccaaccggcaggac
gtgcgcgacggcatcatggcctatcgcatcgccgcccatgctgctgacctggccaagggg
catccgggggcgcaggtgcgtgacaacgcgctgagcaaggcacgcttcgaattccgctgg
gaagaccagttccacctcggcctggacccggagaaggccaaggaattccacgacgagacc
ctgcccaaggacgcgcacaagctggcccacttctgttcgatgtgcggcccgcatttctgt
tcgatgaagatcacccaggacgtgcgcgagtacgccgagaagggcatgcaggaaaagtcc
gagcagttccgggcggccggcgccgaggtgtaccagcagggctga
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