Stenotrophomonas sp. MYb57: CLM74_17985
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Entry
CLM74_17985 CDS
T05384
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
stem
Stenotrophomonas sp. MYb57
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AVJ34539
LinkDB
All DBs
Position
complement(3957291..3960335)
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AA seq
1014 aa
AA seq
DB search
MSHVVPRGFRQRRLTVSLLQILAMPSLLALSAPAAWAGCDATAPVAGQTVTCSSTAPNPE
TAAISASGAAGITVNVGNGAQLQQAGAGSAVALLGAGGHVLTNLGTISSASGTAVQLGGG
SRVDNTGSISSGSGIALQFSGAGDSELVNRGTISGSSGVQFGAGNDRLQMLAGSISGGVQ
QGDGNDVLLLSGGTIDSLDQGNGDDQLTVNAGTITGLVTQGSGRDDFVMTGGTIGALQQG
DNIDTFRMSGGRIVGAFEDGDQAWMTGGRIGRVNMKLDKNLWDMSGGTVDGNVVTGFDTD
TIIISNDAYIGGNISVSGGADSVTITGGTVRGQVLLSTGNDTFNWNGGGIVYGAIDMGPD
DDVATLGNLNQANLGAVPLFDGGTGSDRLSFNNVKTAGVGRFQNWEAISLASSTELTFDG
DLVLGDSATGTGSLNVDETSTLFGGGGNHAIRPFATAALVNMVNAGRIDLTNNSGAGDAF
TIRGNYRGDGGGVYLQTVLGADDSASDRLVFDGGTATGSTGLGIINTGGGGAATLVDGIL
VVQALNGATTAPGAFSLFAPVSAGAYEYFLFKGGVSAGTGENWYLRSTLAAGPTPAPNGG
GEVLPPPPPTPPVAPPPPIPPAPPPPPEGATDPDLTAGETAPPPPPPEPAPVAPPSDPPV
PDVPVAGGSLPGTGSPPPSAGARPAAPNENGLVPLYRLETAAYAVVPPLLRETSLASLGT
FHERQGEQRLLYNQGAFRTAWGRLVGQSSEIHWKGDARPGFDGDVMGVQAGLDVWAASGD
SHRNQIGVFVGRTRADGRITGLAVGWDNVLVGQSRLDDKHVGLYWTLTDSSGGYIDAVAM
QSRYDGRTRSSRGLGIDLKGDGTTLSLEAGKPLLQFGQSSWWLEPQLQVIWQRSSLDDQR
DLVSTVSFDNDNAWTGRVGLRLAGDYQLADNGWQPYFKLNYWHGRSGEDRILFDSDAIIN
SQRSRAVEAGVGVVGRFNRTISAYAVADYTREVGGSDNGKRRIIEGNIGLRADW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgtcgtcccgcgcgggttccgccagcgccgcttgaccgtttccctgctgcag
atcctggcgatgccctcgctgctcgccctgtccgcccctgccgcctgggccgggtgcgac
gcgacggctcccgtggccgggcagaccgtcacctgcagcagcaccgcccccaatcccgag
acagcagccatcagcgccagtggcgcggcaggtatcaccgtgaatgttggcaatggcgcg
cagctgcagcaggccggcgcgggcagcgccgtcgccctgctcggcgcgggcgggcacgtg
ctcaccaatctcggcaccatcagctcggcgagcggtaccgcggtacagcttggcggcggc
agccgcgtcgacaataccggcagcatcagttccggcagcggtatcgcactgcagttcagc
ggtgccggcgacagcgagctggtcaaccgcggcaccatcagtggcagcagcggcgtgcag
ttcggtgccggcaacgatcgtctgcagatgctggccggcagcatcagcggcggcgtgcag
cagggcgatggcaacgacgtgctgctgctcagcggcggcaccatcgacagcctcgaccag
ggcaatggcgatgaccagctgaccgtcaacgccggcaccatcaccgggctggtgacgcag
ggcagtggccgcgatgatttcgtcatgaccggcggcaccatcggcgctctgcagcagggc
gacaacatcgacaccttccgcatgagcggtggccgcatcgtcggcgcgttcgaagatggc
gaccaggcgtggatgaccggcggccgcatcggccgcgtcaacatgaaactggacaagaac
ctgtgggacatgtccggcggcactgtcgacggcaacgtggtcaccggcttcgacaccgac
accatcatcatctccaacgacgcctacatcggcggcaacatcagcgtcagcggcggcgcc
gacagcgtcaccatcaccggtggcacggtgcgtggccaggtgctgctgagcaccggcaac
gacaccttcaactggaatggcggcggcattgtctacggcgccatcgacatgggcccagac
gatgacgtcgcgaccctgggcaatctcaaccaggccaacctcggcgctgtaccgctgttc
gatggtggcaccggcagcgatcgcctcagcttcaacaacgtcaagaccgctggcgtcgga
cgcttccagaactgggaagcgatcagcctggccagcagcaccgagctcaccttcgatggc
gacctggtgctgggcgacagtgccaccggcaccggcagcttgaacgtggacgagaccagc
acgctgttcggcggtggcggcaaccatgcgatccgtccgttcgcgacagctgcgctggtg
aacatggtcaacgccggacgcattgatctgaccaacaacagcggcgccggcgatgccttc
accatccgtggcaactatcgcggcgacggcggtggcgtgtacctgcagaccgtgctgggt
gcggacgactcagccagcgaccgcctggtctttgatggcggcaccgccaccggcagcacc
ggccttggcatcatcaacaccggtggcggaggagcggccacgctggtcgacggtatcctg
gtggtgcaggcgctgaacggcgcaaccaccgcgccaggcgcgttctcgttgttcgcaccg
gtctcggccggtgcctacgagtatttcctgttcaagggcggcgtcagcgccggcaccggc
gagaactggtacctgcgttcgacattggcggccgggccgacgcccgcgccgaacggcggc
ggcgaagtactgccaccgccaccgccgacgcccccggtggcgccaccaccgccgattccc
ccggcacccccgccgccgccagagggtgccaccgatccggacctgaccgcaggcgagacc
gcaccgccgccaccgccgccggaacctgcgcccgtagcgccgcccagtgatccacccgta
ccggacgtgccggtggccggtggcagcctgcccggtaccggttcgccgccgcccagtgcg
ggggcaaggcccgccgcgccgaacgagaacggcctggtgccgctgtaccgcctggagacc
gcggcctacgccgtggtgccaccgctgctgcgcgagacctcgctggccagcctggggacc
ttccatgagcgccagggcgaacagcgcctgctgtacaaccagggcgccttccgcacggca
tggggacggctggtcgggcagagcagcgagatccactggaaaggcgatgcacggcccggc
ttcgatggtgacgtgatgggtgtgcaggcaggcctggatgtgtgggctgccagcggtgac
agccaccgcaaccagatcggcgtgttcgtcggccgcactcgcgccgatggcaggatcacc
ggcctggcggtgggctgggacaacgtgttggtcggccagagccggttggacgacaagcac
gtgggcctgtactggacgttgaccgacagcagcggcggctacatcgacgcggtggcgatg
cagagccgctacgacggccgcacgcgctcctcgcgcgggctgggcatcgacctcaagggc
gatggcaccacgctgtcgctggaagcgggcaagccactgctgcagttcgggcagtcatcg
tggtggctggaaccgcagctgcaggtgatctggcagcgcagttcactggatgaccagcgt
gatctggtgtccaccgtttccttcgacaacgacaacgcctggaccggccgcgtcggcctg
cgcctggcgggcgattaccagttggccgacaacggctggcagccgtacttcaagttgaac
tactggcatggccgttcaggcgaggaccgcatcctgttcgacagcgacgcgatcatcaat
tcgcagcgctcgcgtgctgtggaggccggtgtcggcgtggtcgggcgcttcaaccgcacg
atcagcgcgtatgccgtggccgactacacccgcgaggttggtggcagcgacaacggcaag
cgccgcatcatcgaaggcaacatcggcctgcgcgctgactggtga
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