Stenotrophomonas sp. MYb57: CLM74_18495
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Entry
CLM74_18495 CDS
T05384
Name
(GenBank) DNA-deoxyinosine glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLM74_18495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_18495
Enzymes [BR:
stem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CLM74_18495
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLM74_18495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVJ34639
LinkDB
All DBs
Position
complement(4075859..4076428)
Genome browser
AA seq
189 aa
AA seq
DB search
MSAATLCIGLPAQVNADCRVLLLGSMPGIASLQAQHYYAHPRNRFWPLLGDLCGFDPAMP
YAQRLQALAANGVGLWDVIGRCERRGSLDADIVRGTEVANALPALIAALPDLQLIGCNGG
AAMQAFQRWVQPQLATSAKVLALPSTSPANAAWSLPRLRQAWQPVAVALATSSGHRQDNT
LPTGSAGGP
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctgcaacgttgtgcatcggcctgcctgcgcaggtgaacgctgattgccgggtg
ttgctgctgggttcaatgcccggtatcgcttcgttgcaggcacagcattactacgcgcac
ccgcgcaatcgtttctggcccttgctcggcgatctgtgcggcttcgacccggcaatgccg
tacgcgcagcgactgcaggcgctggcagccaatggtgtcggcctctgggatgtgatcggc
cgctgcgaacgacgcggaagcctggatgcggacatcgtgcgtggcacggaagtggccaat
gcacttcccgcactgatcgccgcactgcctgacctgcagctgatcggctgcaacggtggc
gcggccatgcaggccttccagcgctgggtgcagccgcagctggccacgtcggccaaggtg
ctggcgctgccgtccaccagtccggccaacgcagcgtggtccttgccgcgcctgcgccag
gcctggcagccggtggccgtcgcactggcgacatcaagcggacatcggcaggacaatacg
ctaccgactggaagcgccggcgggccatga
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