KEGG   Stenotrophomonas sp. MYb57: CLM74_18495
Entry
CLM74_18495       CDS       T05384                                 
Name
(GenBank) DNA-deoxyinosine glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
stem  Stenotrophomonas sp. MYb57
Pathway
stem03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:stem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLM74_18495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stem03400]
    CLM74_18495
Enzymes [BR:stem01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     CLM74_18495
DNA repair and recombination proteins [BR:stem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CLM74_18495
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AVJ34639
LinkDB
Position
complement(4075859..4076428)
AA seq 189 aa
MSAATLCIGLPAQVNADCRVLLLGSMPGIASLQAQHYYAHPRNRFWPLLGDLCGFDPAMP
YAQRLQALAANGVGLWDVIGRCERRGSLDADIVRGTEVANALPALIAALPDLQLIGCNGG
AAMQAFQRWVQPQLATSAKVLALPSTSPANAAWSLPRLRQAWQPVAVALATSSGHRQDNT
LPTGSAGGP
NT seq 570 nt   +upstreamnt  +downstreamnt
gtgagcgctgcaacgttgtgcatcggcctgcctgcgcaggtgaacgctgattgccgggtg
ttgctgctgggttcaatgcccggtatcgcttcgttgcaggcacagcattactacgcgcac
ccgcgcaatcgtttctggcccttgctcggcgatctgtgcggcttcgacccggcaatgccg
tacgcgcagcgactgcaggcgctggcagccaatggtgtcggcctctgggatgtgatcggc
cgctgcgaacgacgcggaagcctggatgcggacatcgtgcgtggcacggaagtggccaat
gcacttcccgcactgatcgccgcactgcctgacctgcagctgatcggctgcaacggtggc
gcggccatgcaggccttccagcgctgggtgcagccgcagctggccacgtcggccaaggtg
ctggcgctgccgtccaccagtccggccaacgcagcgtggtccttgccgcgcctgcgccag
gcctggcagccggtggccgtcgcactggcgacatcaagcggacatcggcaggacaatacg
ctaccgactggaagcgccggcgggccatga

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