Stenotrophomonas sp. MYb57: CLM74_18940
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Entry
CLM74_18940 CDS
T05384
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLM74_18940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_18940
Enzymes [BR:
stem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLM74_18940
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLM74_18940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AVJ34716
LinkDB
All DBs
Position
4162553..4164763
Genome browser
AA seq
736 aa
AA seq
DB search
MGRYTDPMLAPESGPVPTLQVALPVPLPRLFDYLPPQGEGPTVAVGCRLKVPFGNRELIG
VVAGHGQTEDSQGLRQALAWCDTTPLLQGELWQSLQWLARYTHAPWGEVLSTALPGPLRH
GEPLPDTHHWGWQLTAEGHAQREKLRAGSRPRQLAELLAEAVVDEDVLSARMQDWRVAAR
SLGKRDLAERIALSVAPQHAQPLPGPTLNAEQAEAVAAITAAESFQAFLLDGVTGSGKTE
VYLQAIIHCLAQGRQALVLVPEIGLTPQTLARFRGRLGIAVHALHSGLTDNERARVWAAA
SRGEARVIVGTRSAVFIPLPQPGLLIVDEEHDGSYKQQDGIRYHARDFALVRAKAQGIPV
LLGSATPSLETLHNAYAGRYAHLRLKQRAGDARPPRVRILDVRKRPLRDGLSADVLAGIG
EHLQRGQQVLVFKNRRGYAPVLLCHDCGWTAPCNRCDAPMTVHGGGRRLQCHHCGARQPA
PLACPACGSLALQPQGIGTERLEEHLVSAFADFPVVRIDRGTTARRDALEQQLAKLGNAP
GILVGTQILAKGHDLPKLTLVVVVGIDEGLFSADFRASEKLAQQLIQVAGRAGRARDPGE
VWLQTHHPGHPLLETLVNGGYHPFAQAELNQRQAAGFPPFAHLALMRAEAQQVEHANAFL
LAARKLLGEKDMVEAYGPMPAPMPRRAGYQRTQLLLSAAQRPPLHGVLAQLVPQLYALPE
ARKVRWSLDVDPTDLY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttacactgacccgatgctcgcccctgaatccggccctgtcccgaccctgcag
gtcgccctgcccgtgcccctgccgcgcctgttcgactacctgccaccgcagggcgaaggc
ccgacggtagcggtcggctgccggctgaaggtgccgttcggcaaccgcgaactgatcggc
gtggtggccggccacgggcaaaccgaggacagccagggcctgcgccaggcactggcctgg
tgtgacacgacaccactgctgcagggcgagttgtggcagagcctgcagtggctggcccgc
tatacccacgccccctggggcgaagtactgagcaccgccctgcctggcccgctgcggcat
ggcgaaccgctgcccgacacccatcactggggctggcagctgacagccgaaggccatgcc
cagcgcgagaagctgcgcgccggcagccgtccacggcaattggccgagctgctggccgaa
gccgtggtggacgaagatgtcctgtccgcacgcatgcaggactggcgggtggccgcacgc
agcctgggcaagcgcgacctggccgagcgcatcgccctgagcgtggcgccgcagcacgcc
cagcccctgcccggccccaccctcaatgcggagcaggccgaagcggtggccgcgatcacc
gccgccgaaagcttccaggcattcctgctggacggggtgaccggcagcggcaagaccgag
gtctacctgcaggccatcatccattgcctggcgcagggcaggcaggccctggtgctggtg
cccgagatcggcctgaccccgcagaccctggcgcgcttccgcggccgtctcggcatcgcc
gtgcacgcgttgcactcggggctgaccgacaacgaacgcgcgcgggtctgggctgcggcc
tcgcgcggcgaagcacgggtgatcgtgggcacgcgttcggcggtgttcattccgctgccg
cagcccggcctgctgatcgtggacgaagagcacgacggcagctacaagcagcaggacggc
atccgctaccacgcacgtgatttcgctctggtgcgggccaaggcgcagggcattcctgtg
ctgctgggcagcgccacgccgtcattggagaccctgcacaacgcctatgccggccgctat
gcgcacctgcgcctgaaacagcgcgccggtgatgcccgaccgccgcgcgtgcgcatcctc
gacgtccgcaagcgtccgctgcgcgatggcctttccgccgacgtactggccggcatcggc
gaacacctgcagcgtggccagcaggtgctggtgttcaagaaccgccgtggctatgcgccg
gtgctgctgtgccacgactgcggctggaccgcaccctgcaaccgctgcgatgcaccgatg
accgtgcatggcggtggccgtcgcctgcaatgccatcactgcggtgcgcggcagccggca
ccactggcctgccccgcctgcggcagcctggccctgcagccacagggcatcggcaccgag
cggctggaagaacacctggtcagtgccttcgccgatttcccggtggtgcgcatcgaccgt
ggcaccaccgcccgccgcgatgcgctggagcagcagctggccaagctcggcaacgcgccc
ggcatcctggtcggcacgcagatcctggccaagggccacgacctgcccaagctgacgctg
gtggtggtggtgggcatcgacgaaggcctgttctcggccgatttccgcgccagcgaaaaa
ctggcgcagcagctgatccaggtagccggccgcgccggtcgcgcgcgcgatccgggtgaa
gtgtggctgcagacccatcatccgggccatccgctgctggagacactggtgaacggtggc
taccacccgttcgcgcaggccgaactcaaccagcgccaggcagccgggttcccgcccttc
gcgcacctggcattgatgcgtgccgaagcgcagcaggtcgagcatgccaacgcgttcctg
ctcgctgcgcggaaactcctaggtgaaaaggacatggtggaggcctacgggccgatgccg
gcgccgatgccacgccgtgccggttatcagcgcacgcagctgctgctgtcggcggcacag
cggccgccgctgcatggggtactggcacagctggtgccgcagttgtacgcgctgccggag
gcacgcaaggtgcgctggtcgctggatgtggatccgacggatctgtactga
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