KEGG   Stenotrophomonas sp. MYb57: CLM74_19440
Entry
CLM74_19440       CDS       T05384                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
stem  Stenotrophomonas sp. MYb57
Pathway
stem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLM74_19440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stem03019]
    CLM74_19440
Messenger RNA biogenesis [BR:stem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CLM74_19440
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AVJ34811
LinkDB
Position
complement(4275658..4276281)
AA seq 207 aa
MIDPDGYRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELQEETGL
LPEHVEVLGATPGWLRYKLPARAIRRNERQVCIGQKQVWFLLRLTGDEAHVSLDHTDSPE
FDHWRWVDFWYPVEHVVVFKRGVYARALRHLAPLAQGVAGQGISAMPKSAAEAWMPGHAA
GHDRPRKRTPMRGGYWPRKAKGEPGAV
NT seq 624 nt   +upstreamnt  +downstreamnt
gtgatcgatccggacggctatcgaccgaacgtcggcatcgtgctgatgcggcaggacggg
caggtgttctgggcacgacgtgtgcgccgggatggctggcagttcccgcagggtggcatg
aacaccgacgagacgcctgtcgaggccatgtatcgtgaactgcaggaagagaccgggctg
ttgccggagcacgttgaagtgcttggggcgacaccgggctggctgcgttacaagctgccg
gcgcgtgccatccgccgcaatgaacgccaggtctgcatcggccagaagcaggtctggttc
ctgctgcgcctgaccggtgatgaggcccacgtcagcctggaccataccgactcgcctgag
ttcgatcattggcgctgggtcgacttctggtatccggtggagcatgtggtggtgttcaag
cgtggcgtctacgcgcgcgccctgcgacatctggcgccgttggcccagggggtagcgggg
cagggcatcagtgccatgcccaagagcgctgccgaggcctggatgccaggccacgcggcc
ggccacgacaggcccaggaagcgcacgcccatgcgcggcgggtactggccgcggaaagca
aagggtgaaccgggagccgtttga

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