Stenotrophomonas sp. MYb57: CLM74_19440
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Entry
CLM74_19440 CDS
T05384
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM74_19440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stem03019
]
CLM74_19440
Messenger RNA biogenesis [BR:
stem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLM74_19440
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AVJ34811
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All DBs
Position
complement(4275658..4276281)
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AA seq
207 aa
AA seq
DB search
MIDPDGYRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELQEETGL
LPEHVEVLGATPGWLRYKLPARAIRRNERQVCIGQKQVWFLLRLTGDEAHVSLDHTDSPE
FDHWRWVDFWYPVEHVVVFKRGVYARALRHLAPLAQGVAGQGISAMPKSAAEAWMPGHAA
GHDRPRKRTPMRGGYWPRKAKGEPGAV
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggacggctatcgaccgaacgtcggcatcgtgctgatgcggcaggacggg
caggtgttctgggcacgacgtgtgcgccgggatggctggcagttcccgcagggtggcatg
aacaccgacgagacgcctgtcgaggccatgtatcgtgaactgcaggaagagaccgggctg
ttgccggagcacgttgaagtgcttggggcgacaccgggctggctgcgttacaagctgccg
gcgcgtgccatccgccgcaatgaacgccaggtctgcatcggccagaagcaggtctggttc
ctgctgcgcctgaccggtgatgaggcccacgtcagcctggaccataccgactcgcctgag
ttcgatcattggcgctgggtcgacttctggtatccggtggagcatgtggtggtgttcaag
cgtggcgtctacgcgcgcgccctgcgacatctggcgccgttggcccagggggtagcgggg
cagggcatcagtgccatgcccaagagcgctgccgaggcctggatgccaggccacgcggcc
ggccacgacaggcccaggaagcgcacgcccatgcgcggcgggtactggccgcggaaagca
aagggtgaaccgggagccgtttga
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