Stenotrophomonas sp. MYb57: CLM74_20740
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Entry
CLM74_20740 CDS
T05384
Name
(GenBank) RNA-binding protein
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
stem
Stenotrophomonas sp. MYb57
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
vWA_Ro60
VWA_CoxE
TROVE
VWA_2
DUF2201
DUF58
Motif
Other DBs
NCBI-ProteinID:
AVJ35045
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All DBs
Position
complement(4555899..4557446)
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AA seq
515 aa
AA seq
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MANLSLFSWMRTPQPPQADTVNEAGGLAYRRDPRAALALYAATGCLNNTFYSDAEAQLQQ
VLALTAQVEPRFIARTALYARQVAHMKDMPALLLAVLSLRDPEAFALVFPRVIDNGRQLR
TFVQIMRSGQVGRRSLGSLPKRRVREWIQQASAETLVRAAIGQQPSLADVIRMVHPKPAN
AERKALYAWIIGRPYDEAQLPAVVQAYEAFKRDPRGLPPDLPFQYYSTLPLDAAQWSALA
RNASWQSMRMNLNTFARNGVFDDPAMVQVIAERLRDPQQVRRARVLPYQLLMAFHAGGGL
PAPILEALQDAMEIATASAPALPGRVVVAVDVSGSMQSPVTGYRKGSSTAARCVDVAALV
AACVLRGQPQAKVLPFDTEVRHVRLNPRDSVMTLARQLAINGGGTSVSAPLHYLNLRREP
VDLVVLVSDNESWRDTRQGGQTATMLQWDALKRRCPQARLVCIDLQPVASSQTVQRGDVL
HIGGFSDAVFDLMAQYAAAAEDGSSWVERIQDMAL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctttcgctcttctcctggatgcgcacgccccagccgccgcaggcagacacc
gtcaatgaagccggtggcctggcctaccgccgcgacccgcgtgccgcgctggcgctgtat
gcggccaccgggtgcctgaacaacaccttctacagcgacgccgaggcacagctgcagcag
gtgctggcgctgaccgcgcaggtcgagccgcgcttcatcgcccgtaccgccctgtacgcc
cgccaggtcgcacacatgaaggacatgccggcgttgctgctggcggtgctgagcctgcgc
gacccggaggcgttcgccctggttttcccgcgggtgatcgacaacggccgccagctgcgc
accttcgtgcagatcatgcgcagcggccaggtggggcgccgctcgctgggctcgctgccc
aagcgcagggtgcgtgagtggatccagcaggcgtcggcggaaacgctggtgcgtgcggcg
atcggccagcagccgtcgctggccgatgtgatccgcatggtgcacccgaagccggccaac
gccgagcgcaaggcgctgtatgcatggatcatcggtcgtccctacgacgaggcgcagctg
ccggcagtggtgcaggcgtacgaggcgttcaagcgtgacccgcgcggactgccgccggac
ctgccgttccagtactacagcacgctgccgctggacgcggcgcagtggtcggcactggcc
cgcaatgcatcgtggcagtcgatgcggatgaacctcaacacgttcgcccgcaatggcgtg
ttcgacgatccggcgatggtgcaggtgatcgcagagcgcctgcgtgatccgcagcaggtg
cgtcgtgcccgcgtattgccctaccagctgctgatggccttccacgccggcggtggcttg
ccggcgccgatcctggaagcgttgcaggacgcgatggagatcgccacggcgtcggccccg
gcattgcctgggcgggtggtggtggcggtggacgtgtccggttccatgcagtcgccggta
accggctaccgcaagggctccagcacggcggcgcgctgcgtggacgtggcggcgctggtt
gcagcctgcgtgctgcgcggccagccgcaggccaaggtgttgccgttcgataccgaggtg
cgccacgtgcgcctgaacccgcgcgacagcgtgatgacgttggcccgccagctggccatc
aacggcggtggtacgtcggtcagcgcgccgctgcactacctcaacctgcggcgcgagccg
gtggacctggtggtgctggtgtcggacaacgagagttggcgtgacacccgccagggcggc
cagacggccacgatgctgcagtgggatgcattgaagcgtcgctgcccacaggcgcggctg
gtgtgcatcgacctgcagccggtggccagcagccagaccgtacagcgcggtgacgtgctg
cacatcggtggcttcagcgatgcggtgttcgacctgatggcgcagtacgccgctgcggcc
gaggacggcagcagctgggtcgagcgcatccaggacatggcgttgtaa
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