Stenotrophomonas sp. MYb57: CLM74_20760
Help
Entry
CLM74_20760 CDS
T05384
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03420
Nucleotide excision repair
stem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLM74_20760
03430 Mismatch repair
CLM74_20760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_20760
Enzymes [BR:
stem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLM74_20760
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLM74_20760
MMR (mismatch excision repair)
Other MMR factors
CLM74_20760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AVJ35049
LinkDB
All DBs
Position
complement(4560742..4562934)
Genome browser
AA seq
730 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAPLGHHLVLAGAGSGKTRVLTHRIAWLHEVEGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPHGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPPKQIAWWINAQKDEGRRPQHIQPEPNDAWLETMRQAYAEYQA
RCDRAGLVDFAELLLRAHELLRDNPPLLSHYRARFREILVDEFQDTNAIQYAFVRVLAGH
EGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILSAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEVKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTLQMTLAE
RVDHVLVRSQLREHWSKESRNALDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGVEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHAAIETPPIKLGALVNHPKFGEGMVTDYEGNGAHARVQIEFADAGSKWL
VMAYANLTVI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacttgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
cccctcggtcaccacctggtgctggccggtgccgggtcgggcaagacgcgcgtactcacc
caccgcattgcctggctgcatgaagtcgaaggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggccgccggcgagatgcgccatcgcatcgacgcgcagctgccgcat
ggcagtcgcggcatgtggatcggcaccttccacggcctggccaaccgcctgctgcgcctg
cactggcaggacgccaagctgcccgaaggcttccaggtgatggattcggacgaccagctg
cggctggtcaagcgcgtggtacaggcgctggagctggatgacggcaagtacccgcccaag
cagattgcctggtggatcaacgcgcagaaggatgagggccgccgcccgcagcacatccag
cccgagccgaacgatgcgtggctggaaaccatgcgccaggcctacgccgagtaccaggcg
cggtgtgaccgtgccggcctggtcgatttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaatccgccgttgctgtcgcactaccgtgcgcggttccgcgagatcctggta
gacgaattccaggataccaacgccatccagtacgccttcgtgcgcgtgctggccgggcac
gagggccacgtgttcgtggtcggtgatgacgaccaggccatctacggctggcgcggtgcc
aaggtcgagaacgtgcagggcttcctgcgcgatttcccgggcgcgcagaccatccgcctg
gagcagaactaccgttccaccgccaacatcctcagcgccgccaacgcggtgatcgcgcac
aatccggaccgcatcggcaagcagctgtggaccgacagtggtgacggcgagccgatcgac
ctgtacgcggcgtacaacgagatggacgaggcgcgctacatcgtcgagcgcgcacggcag
tgggtgcgcgacggcggcagctacaccgaagtggccgtgctctaccgcagcaacgcgcag
tcgcgcgcgctggaagaagcgctgctgagcgaacaggtgccgtaccgcgtgtatggcggc
atgcgcttcttcgagcgcgccgaagtgaaggatgcgctggcctacctgcgcctgctctcc
aaccgcaacgacgacgctgcattcgagcgcgcggtgaatacgcccacgcgtggcatcggt
gaccgcacgctggacgaagtgcgccgcgaagcgcgcgcccagggcatctcgctgtgggaa
gccaccatgctggtgacccagggcagcgcactggcggcacgagcccgcaatgcgctggcc
ggcttcctggtgctggtcaacgaactgcaggcgcagaccctgcagatgaccctggccgag
cgcgtggaccatgtgctggtgcgctcgcagctgcgcgagcactggagcaaggaaagccgc
aacgcgctggattcggaatcgcgcaccgacaacctcgacgaactggtgtcggtggcctcg
cgcttcgtgcgccgtgccgacgacatcgaggaagtgggcgaggacatggacgagctggtc
gcgttcctggcctacgcggcgctggaggccggtgagggccaggcgcaggccggcgaggaa
ggcgtgcagctgatgacgctgcactcggccaagggcctggaattcccgctggtgttcctg
gccggcgtggaagaggggctgttccccagtgcacggtcgctggaggaaagcgggcggctg
gaagaagagcgtcggctggcctacgtcggcatcacccgcgcgcggcagaagctggtgctc
agctacgccgaatcgcggcgcatccacggccaggacaactacagcctgccttcgcgtttc
ctgcgcgagatcccgcgcgagctgctgcacgaagtgcggccgaaggtgcaggtgtcgcgg
ccggcgtcgatgggcgcaagccgggtgatgggacacgccgccatcgaaacgccgccgatc
aagctgggtgcgctggtcaaccatcccaagttcggcgaaggcatggtgaccgactacgaa
ggcaacggtgcccacgcacgcgtgcagatcgagttcgccgacgccggcagcaagtggctg
gtgatggcgtatgccaacctgacggtgatctga
DBGET
integrated database retrieval system
