KEGG   Stenotrophomonas sp. MYb57: CLM74_20875
Entry
CLM74_20875       CDS       T05384                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
stem  Stenotrophomonas sp. MYb57
Pathway
stem03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:stem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLM74_20875 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stem03400]
    CLM74_20875 (xth)
Enzymes [BR:stem01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CLM74_20875 (xth)
DNA repair and recombination proteins [BR:stem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CLM74_20875 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AVJ35071
LinkDB
Position
complement(4585022..4585789)
AA seq 255 aa
MKIASWNVNSLNVRLPHLEQWLKDFGPDIVGIQETKLEDHKFPDSALVAAGYRSVFAGQK
TYNGVALVSREPAQDVQIGIPGFEDEQKRVIAGTFGDLRVINLYVVNGQDVGTDKYEYKL
RWLEAVHAWIAEELQRHPKLIVMGDFNIAPDARDVHDPEVWNDNHILTSTAERGALNKLL
QLGLHDGFRLHNDEAGTFSWWDYRAAGFRRNLGLRIDLTLVSDALKGTAVASGIDREPRT
WERPSDHAPAWVELG
NT seq 768 nt   +upstreamnt  +downstreamnt
atgaaaatcgcctcgtggaacgtcaattcgctcaatgtccgcctgccgcacctggagcag
tggctcaaggacttcggcccggacatcgtcggcatccaggaaaccaagctggaggaccac
aagttccccgactcggcgctggtcgccgccggttaccgcagcgtgttcgccgggcagaag
acctacaacggcgtggcgctggtgtcgcgcgagccggcgcaggacgtgcagatcggcatt
cccggcttcgaggacgagcagaagcgggtcatcgccggcaccttcggcgacctgcgggtg
atcaacctgtacgtggtcaacggccaggacgtgggcaccgacaagtacgagtacaagctg
cgctggctggaggcggtgcacgcgtggatcgccgaagaactgcagcggcatccgaagctg
atcgtgatgggcgacttcaacatcgcccccgatgcgcgcgatgtgcatgacccggaggtg
tggaacgacaaccacatcctgacgtccactgccgagcgcggcgcgctgaacaagctgctg
cagctgggcctgcacgatggcttccgcctgcacaacgatgaggccggcaccttcagctgg
tgggactaccgcgcagcgggtttccgccgcaacctcggtctgcgcatcgacctcaccctg
gtctccgatgcgctgaagggcactgcggtggcctcgggcatcgaccgcgagccgcgcacc
tgggaacgtcccagcgatcatgcgccggcgtgggtggaattgggttga

DBGET integrated database retrieval system