Stenotrophomonas sp. WZN-1: CCR98_00315
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Entry
CCR98_00315 CDS
T04963
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sten03032
]
CCR98_00315
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_00315
Enzymes [BR:
sten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCR98_00315
DNA replication proteins [BR:
sten03032
]
Prokaryotic type
DNA Topoisomerases
CCR98_00315
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCR98_00315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ARZ72702
LinkDB
All DBs
Position
73236..74294
Genome browser
AA seq
352 aa
AA seq
DB search
MPTPSTPERQAARAAGLRYVDDTQPGISRRRAGKGFSYRDADGHAIRDATTLQRIRALAI
PPAYTAVWICAHANGHLQATGRDARGRKQYRYHADWAKERDAGKFDRIIAFGEALPTLRR
RLSRDLKRPGFPQEKVLAMVVALLADTLVRVGNETYAQQNRSFGLTTLRNRHLELLRGGR
VRMRFRGKSGQLQEVTVGDRRLGMLVRRLQQLPGQALFQYRDDDGALQPVDSGAVNDYLR
GVMGEDFTAKDFRTWGGTVAAVQAFAATELPEPASQRALAQAQRAVVCEVASLLGNTPAV
CRKAYIDPCVFAGWERGELAKLAGLRGPRQWEQATLRVLRRARRLSRRGQPQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccccctccacccccgaacgacaggccgcacgtgctgccggcctgcgctatgtc
gatgacacccagccgggcatcagccggcgccgcgccggcaagggtttcagctaccgcgat
gctgatggccacgcgatacgcgacgccaccaccctgcagcggatccgcgcgctggcgatt
ccgccggcctataccgccgtgtggatctgcgcccacgccaacggccacctgcaggccacc
ggccgcgatgcccgcgggcgcaagcagtaccgctaccacgccgactgggcgaaggagcgc
gacgccggcaagttcgaccgcatcattgcgtttggcgaggccctgcctacgttgcggcgg
cggttgtcacgggatctcaaacgacccgggtttccgcaggagaaggtgctggccatggtg
gtcgcgctgctggcggacacgctggtgcgggtgggcaatgaaacctacgcccagcagaac
cgttcgttcgggttgaccacactgcgcaaccgtcacctggaactgctgcgcggtggccgg
gtacgcatgcgcttccgcggcaagtccgggcagctgcaggaggtgaccgtaggcgatcgc
aggctggggatgctggtgcggcgcctgcagcagctgcccgggcaggcgctgttccagtac
cgcgatgacgacggtgcgctgcagccggtcgactccggcgcggtgaacgactacctgcgc
ggggtgatgggcgaggacttcaccgccaaggacttccgcacctggggcgggaccgtggcg
gcggtgcaggcgttcgcggctaccgagctgccggaaccggccagccagcgcgcgttggcc
caggcgcagcgcgcggtggtgtgcgaggtggcgtcgctgttgggaaataccccggcggtg
tgccgcaaggcctacatcgacccgtgcgtgttcgccggctgggagcgcggcgaactggcg
aagctggccggcctgcgcgggccgcggcagtgggaacaggccaccctgcgcgtgctgcgc
agggcgcgcaggctcagccgaagaggtcagccgcagtag
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