Stenotrophomonas sp. WZN-1: CCR98_02590
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Entry
CCR98_02590 CDS
T04963
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sten03009
]
CCR98_02590
Enzymes [BR:
sten01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CCR98_02590
Ribosome biogenesis [BR:
sten03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CCR98_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ARZ73112
LinkDB
All DBs
Position
558422..559123
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AA seq
233 aa
AA seq
DB search
MKLVKLIANLGYGSRKQVQWMFREGRVTDADGEVLYADDQVPHEAIRVDGEPLDPPVGLS
IALHKPAGYTCSTKDTGRLIYDLLPPRFRDRDPVLSTVGRLDRETSGLLLLTDDGSLLHR
IISPKSKLPKVYEVELSDDLRGDEVALFASGTLMLESEKTPLLPAELEVLEARRARLVLH
EGRYHQVRRMFAATGNHVQALHRSRVGGLDLQGLDEGQWRQLTSTDLDTLFAP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctggtcaagctcatcgccaacctgggctatggcagccgcaagcaggtgcagtgg
atgttccgcgaaggccgcgtcaccgatgccgacggcgaagtgctgtacgccgatgaccag
gtgccgcacgaggcgatccgcgtcgatggcgagccgctggacccgccggtggggctgtcg
atcgcgctgcacaagccggccggctacacctgttcgaccaaggacaccggccgcctgatc
tacgacctgctgccgccgcgcttccgcgaccgcgacccggtgctgtccacggtgggccgc
ctcgaccgcgagaccagtggcctgctgctgctgaccgacgatggcagcctgctgcaccgg
atcatctcgccgaagtcgaagctgccgaaggtctatgaggtcgagttgagcgacgacctg
cgcggcgacgaggtagcgctgttcgccagcggtacgctgatgctggagtccgagaagacg
cccctgctgccggctgaactcgaagtgctggaggcgcgtcgtgcgcgcctggtgctgcat
gaaggccgctaccatcaggtacgccgcatgttcgccgccaccggcaaccacgtgcaggcc
ctgcatcgcagccgcgtcggcgggctggacctgcaggggctggacgaagggcaatggcgg
cagctcacttccaccgacctggatacgctgttcgctccatga
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