Stenotrophomonas sp. WZN-1: CCR98_02860
Help
Entry
CCR98_02860 CDS
T04963
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00521
Streptomycin biosynthesis
sten00523
Polyketide sugar unit biosynthesis
sten00525
Acarbose and validamycin biosynthesis
sten00541
Biosynthesis of various nucleotide sugars
sten01100
Metabolic pathways
sten01110
Biosynthesis of secondary metabolites
sten01250
Biosynthesis of nucleotide sugars
Module
sten_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CCR98_02860 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CCR98_02860 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CCR98_02860 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CCR98_02860 (rfbB)
00525 Acarbose and validamycin biosynthesis
CCR98_02860 (rfbB)
Enzymes [BR:
sten01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CCR98_02860 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
DUF7480
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ARZ73165
LinkDB
All DBs
Position
620855..621910
Genome browser
AA seq
351 aa
AA seq
DB search
MPTWLVTGGAGFIGGNFVLEAVARGVKVVNLDALTYAGNLKTLSSLDGNPNHVFVQGDIG
DSALVTRLLAKHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
EQGAAFRFLHVSTDEVYGTLGETGKFSETTQYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GQVGETYNVGGNSEKQNIEVVQAICALLDQRRPRADGQPRSSQITYVTDRPGHDRRYAID
ASKLKNDLGWEPAYTFEQGIAYTVDWYLDNQDWVNGVLDGSYRLQRIGTTA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacatggcttgtcaccggcggtgccggattcattggcggtaacttcgttctcgag
gccgtggcgcgcggcgtcaaggtcgtcaatctcgacgccctgacctatgccggcaacctg
aagaccctgtccagcctggacggcaacccgaaccacgtgttcgtgcagggtgacatcggc
gacagcgccttggtcacccgcctgctggccaaacaccagccggacgcggtgctcaatttc
gccgccgagagccacgtcgaccgttccatcgatggcccgggtgcgttcatccagaccaat
gtggtgggcaccctgggcctgctggaagcggtgcgcgactactggaaggcgttgccggcc
gagcagggcgcagcattccgcttcctgcatgtgtccaccgacgaggtgtacggcaccctc
ggtgagaccgggaagttcagcgaaacgacccagtacgcccccaattccccgtactcggcg
tcgaaggccgcatcggaccacctggtgcgtgcattccaccacacctacgggctgccggtg
ctcaccaccaactgctccaacaactatggcccgtaccatttccccgaaaagctgatcccg
ctggtgatcgccaaggccctggccggcgaaccgctgccggtctacggcgatggcaagcag
gtgcgcgactggctgttcgtgtccgaccactgcgaagcgatccgcaccgtgctggccaag
ggccaggtcggcgagacctacaacgtcggcggcaattcggaaaagcagaacattgaagtg
gtgcaggcgatctgcgcactgctggaccagcgccgcccccgcgcggacggccagccgcgc
agcagccagatcacctacgtcaccgaccgacccggccatgaccgccgctatgcgatcgat
gcctcgaagctgaagaacgacctgggctgggaaccggcttacacgttcgagcagggcatc
gcctacaccgtcgactggtacctggacaaccaggactgggtcaatggcgtgctcgacggc
agctaccgcctgcagcgcatcggcaccacggcctga
DBGET
integrated database retrieval system