Stenotrophomonas sp. WZN-1: CCR98_04330
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Entry
CCR98_04330 CDS
T04963
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sten03009
]
CCR98_04330
Enzymes [BR:
sten01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CCR98_04330
Ribosome biogenesis [BR:
sten03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CCR98_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF8666
Motif
Other DBs
NCBI-ProteinID:
ARZ73436
LinkDB
All DBs
Position
940808..941530
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AA seq
240 aa
AA seq
DB search
MRHGLARVLSKAGVCSRSEAARWIAEGRVRVSGRIVRDPEFPIGQPAPPIEVDGQPMDAP
QRLYLMLNKPRGVVTTAQDERGRDTVYRCFDGAGLPWIAPVGRLDKASEGLLLFSNDPQW
AARLTDPETGPQKTYHVQVDRLPDEDTLAALRAGIEDEGEFLVAQAVRVLRSGDKTAWLE
VVLDEGRNRHIRRLLAAFDLQVLRLVRVAIGGLLLGDLGKGQWRVLEVSDQQRLGAAAPG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccatggcttggcgcgcgtgctttccaaggccggcgtgtgctcgcgcagcgaggcc
gcgcgctggatcgccgagggccgcgtgcgcgtgtccggccgcatcgtccgtgatcctgaa
ttcccgattggacagcctgcgccaccgatcgaagtcgatggccagccgatggatgcgccg
cagcgtctgtacctgatgctcaacaagccgcgcggcgtggtgaccacggcgcaggacgag
cgtggccgcgacaccgtgtatcgctgctttgatggtgccggcctgccgtggatcgcgccg
gttggacgcctggacaaggccagcgaagggctgttgttgttcagcaacgatccgcagtgg
gcggcacgcctgaccgatccagagaccggcccgcagaagacctatcacgtgcaggtggat
cgtcttcccgatgaggacaccctggccgcgctgcgcgccggtatcgaagacgagggcgag
ttcctcgtcgcccaggccgtgcgcgtgctgcgcagtggcgacaagaccgcatggctggag
gtggtcctcgacgagggccgcaaccgccatatccgccgcctgttggcggccttcgacctg
caggtgctgcgcctggtccgggtcgcgatcggtgggctgctgctcggcgatctcggcaag
gggcaatggcgggtgctggaggtcagcgaccagcagcggctgggggccgctgcaccgggc
tga
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