Stenotrophomonas sp. WZN-1: CCR98_04580
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Entry
CCR98_04580 CDS
T04963
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sten01011
]
CCR98_04580
Enzymes [BR:
sten01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CCR98_04580
Peptidoglycan biosynthesis and degradation proteins [BR:
sten01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CCR98_04580
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
ARZ73474
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All DBs
Position
complement(990447..991649)
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AA seq
400 aa
AA seq
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MMRRSLPLALGLVLGLAGTAGAQSLGAGISQNLTAAAALPLDPAALPAASVRNGQEIFSS
FRDGLAEPACNADATSPRWQKQFAHAPSRLANQDDDALVLFGYVVEELRKANLPTEFALI
PFVESGYRPNARNGSGPTGLWQFIATTARNHRVPMANGYDGRLSAVDSTQAAVRYLKTLH
GMFGGDWRLATMAYNAGEYRVLQSLRKAGMNAQNAKPSALPGLSPVTYAYVEKLHALACV
LEDVEDQPGVMASLDRTVPVLKDHTLPAGTSVQQWAAQRALDPARIARLNPALAGGGRAS
SGTTRVLAPVSAANATVAEAATALVASAAPAATATPTPQVAKTVAAIADRPRSRRHTVRD
GESAWTIARRYGMPVKALLSLNGLSGSSVLKPGAVLRVED
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccgaagtctgccgctggccctgggcctggtcctggggctggccggaaccgcc
ggtgcccagtcgctgggcgccggcatcagccagaacctgaccgccgccgcagccctgccg
ctggatccggccgcgttgccggccgcgtcggtccgcaatggccaggagatcttctccagc
ttccgcgacggcctggccgagcccgcctgcaacgccgacgccaccagcccgcgctggcag
aagcagttcgcccatgccccgtcgcgtctggccaaccaggatgacgatgcgctggtgctg
ttcggctacgtggtcgaagagctgcgcaaggccaacctgcctaccgaattcgcactgatt
ccgttcgtggaaagcggctatcggcccaatgcccgcaacggcagcggcccgaccggcctg
tggcagttcatcgccaccaccgcgcgcaaccaccgtgtgcccatggccaacggctacgac
ggccgcctgtcggcggtcgattcgacccaggccgcagtgcgctacctgaagaccctgcac
ggcatgttcggcggcgactggcgcctggccaccatggcctacaacgccggcgagtaccgc
gtgctgcagtcgctgcgcaaggccggcatgaacgcgcagaacgccaagccgtcggccctg
cccggcctgtcgccggtcacctatgcctacgtcgagaagctgcatgccctggcctgcgtg
ctggaagacgtggaagaccagcccggcgtgatggcctcgctggaccgcaccgtgccggtg
ctgaaggaccacaccctgccggctggcaccagcgtccagcagtgggccgcacagcgcgcc
ctggacccggccaggatcgcccgcctgaaccccgccctggcgggcggcggccgcgcctcg
tcgggcaccacccgcgtgctcgcgccggtgtcggccgccaatgcgacagtcgcggaagcg
gccaccgcgctggtggccagcgccgcaccggctgccaccgccacgccaacgccgcaggtc
gccaagaccgtcgccgcgattgccgatcgtccgcgcagccgccgccacaccgtgcgtgac
ggcgagtcggcctggaccattgcccgccgctacggcatgccggtcaaggccctgctgtcg
ctgaacggcctgagcggcagcagcgtgctgaagccgggcgcggtactgcgcgtcgaggac
tga
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