Stenotrophomonas sp. WZN-1: CCR98_04740
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Entry
CCR98_04740 CDS
T04963
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03030
DNA replication
sten03430
Mismatch repair
sten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCR98_04740
03430 Mismatch repair
CCR98_04740
03440 Homologous recombination
CCR98_04740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sten03032
]
CCR98_04740
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_04740
Enzymes [BR:
sten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCR98_04740
DNA replication proteins [BR:
sten03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCR98_04740
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCR98_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
AAA_18
AAA_30
PIF1
AAA_7
AAA_19
AAA_2
Mg_chelatase
nSTAND3
TsaE
Se-cys_synth_N
AAA_24
AAA_assoc_2
Glyco_tranf_2_5
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ARZ73503
LinkDB
All DBs
Position
1025383..1027437
Genome browser
AA seq
684 aa
AA seq
DB search
MENGGLMSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTI
ARIFAKSLNCEQGTSADPCGQCAACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYM
PSRGKYKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFN
LKRLDEDQIQGQMTRILAAEEIEADGSAIVQLAKAADGSLRDGLSLLDQAIAYAGGALRE
DVVRTMLGTVDRTQVAAMLDALAEGDGPRLLQVVAALAEFSPDWSGVLEALAEGLHRIQV
QQLVPGAAAAEGLDAAAFAERLRPEVVQLWYQMALNGRRDLPLAPSPRAGFEMAVLRMLA
FRPAAAVPPVPKAVDGAVGGAPGGSAAGSGAGTGSHDATPAAAAASASPAVAAPVQVAPR
EPEPEPEPAPQPEPDPTPEPEPVPVEEPVSPPPVKAEAEALAPAVTAESSDDLPPWATGE
AEARDEALAAEMSGPDAAMAAPWHEPPAPVAAPSEPAPPERPFRAEGIAIAPAEHAKPAP
AHATAPQEGVSELATAEDWLDLVANSGLSGPSRQLAANAAFISCQHGTLKLGLSPGFEYL
RSERALAALGEMLQKALGQAPKIVVETVETEHVPAETLHQRADRQRGERQQVAEAVFMDD
PEVQVLIQQHGARVVSDSIRSFDE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggtggcctgatgtcctatctcgtccttgcccgcaagtggcgtccgaagcgt
tttgccgagctggtgggccaggaacacgtggtccgtgcgctcagcaacgcgctggacagc
ggccgggtccaccacgcgttcctgttcaccggcacccgcggcgtgggcaagaccaccatc
gcgcgcatcttcgccaagtcgctgaactgcgagcagggcaccagcgccgatccgtgcggc
cagtgcgccgcctgcctggacatcgacgccggccgctacatcgacctgctggaaatcgac
gccgcgtccaacaccggtgtggacgacgtgcgcgaggtgatcgagaacgcgcagtacatg
ccctcgcgcggcaagtacaaggtctacctgatcgacgaagtgcacatgctgtccaaggcg
gcgttcaatgcgctgctgaagacgctggaagaaccgccggagcatgtgaagttcctgctg
gccacaaccgatccgcagaagctgccggtcaccgtgctcagccgctgcctgcagttcaac
ctcaagcgcctggacgaagaccagatccagggccagatgacccgcatcctggcggccgaa
gagatcgaggccgacggcagcgccatcgtgcagctggccaaggccgccgatggcagcctg
cgtgacggcctgtcactgctggaccaggcgatcgcctatgccggcggcgcgctgcgcgag
gacgtggtgcgcaccatgctgggtaccgtggaccgcacccaggtggcggcgatgctcgat
gcgctggccgagggcgatggcccgcgcctgctgcaggtggtggccgcgctggccgagttt
tcgccggactggagtggcgtgctggaagcgctggccgaagggctgcaccgcatccaggtg
cagcagctggtgccgggcgccgccgccgcggaaggcctggatgcggcggcattcgccgag
cgcctgcgcccggaagtggtgcagctctggtaccagatggccttgaatggccgccgcgac
ctgccgttggcaccgagcccccgcgcgggctttgaaatggcggtgctgcgcatgctggcg
ttccgtccggccgcagcggtaccgccggtgccgaaggccgtcgacggcgcggtgggcggc
gcgccgggtggcagcgctgccggcagtggcgccggtaccggtagccacgatgcgacgccg
gctgctgccgccgcttcggccagcccggcggtggccgcgccggtgcaggttgcgccgcgc
gaacctgaacccgaacccgagccggccccgcaaccggaaccggatccgacgcctgagccc
gagccggttccggtggaagagcccgtgtcaccgccgccggtgaaggccgaggcagaagcg
ctggcgcctgccgtcactgcagagtcaagcgacgacctgccgccctgggccaccggcgaa
gccgaggcgcgtgacgaggcgttggcggccgagatgtccggcccggacgccgccatggct
gcgccctggcacgaaccgccggctcccgtcgcggctcccagcgagcctgcgccgcccgag
cgcccgttccgcgccgaaggcattgccattgccccggccgaacatgccaagccggccccg
gcgcatgccaccgcgccgcaggaaggtgtcagcgagctggccactgccgaagactggctg
gatctggtcgccaacagcggcctgagcggcccctcgcggcagctggccgccaacgccgcg
ttcatcagctgccagcatggaaccttgaaactgggcctttcgcccggatttgaatacctg
cgctcggagcgcgcgctggctgccctgggcgagatgctgcagaaggccctcggccaggcg
ccgaagatcgtggtcgagaccgtggaaaccgaacacgttccggccgagaccctgcatcag
cgtgccgaccgccagcgtggcgagcggcagcaggtggcagaggctgttttcatggacgac
ccggaagtacaggtgctgatccaacagcacggtgcccgggttgtttccgattccatccgt
tcttttgacgagtaa
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