Stenotrophomonas sp. WZN-1: CCR98_05420
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Entry
CCR98_05420 CDS
T04963
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K12526
bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:
4.1.1.20
2.7.2.4
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00260
Glycine, serine and threonine metabolism
sten00261
Monobactam biosynthesis
sten00270
Cysteine and methionine metabolism
sten00300
Lysine biosynthesis
sten00470
D-Amino acid metabolism
sten01100
Metabolic pathways
sten01110
Biosynthesis of secondary metabolites
sten01120
Microbial metabolism in diverse environments
sten01230
Biosynthesis of amino acids
Module
sten_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
sten_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CCR98_05420 (lysA)
00270 Cysteine and methionine metabolism
CCR98_05420 (lysA)
00300 Lysine biosynthesis
CCR98_05420 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CCR98_05420 (lysA)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
CCR98_05420 (lysA)
Enzymes [BR:
sten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.4 aspartate kinase
CCR98_05420 (lysA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CCR98_05420 (lysA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
AA_kinase
Orn_DAP_Arg_deC
ACT_9
Ala_racemase_N
ACT
Motif
Other DBs
NCBI-ProteinID:
ARZ73631
LinkDB
All DBs
Position
1149006..1151600
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AA seq
864 aa
AA seq
DB search
MSASPLVDRWIVLKFGGTSVSRRHRWDTIGKLAKKRAEETGSRVLVVVSALSGVTNELTA
IADGAPDSRDRVAALVERHEGFLAELGLGREVLAERLAVLQGLLDDPRAATRPLHWQAEV
LGQGELLSSTLGAAYLHASGLDMGWMDARQWLDAMPPQPNQSDWSQRLSVNCQWRADAEW
MQRFRAQPTRLLITQGFISRHADGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGMF
SANPKDVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDAGVPMAILDTERPELPGT
SIDGSAAPVPGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFNLFKKHGLSVDLIGSAET
NVTVSLDPSENLVNTDVLAALSADLSQICKVKVIVPCAAITLVGRGMRSLLHKLSDVWAT
FGRERVHMISQSSNDLNLTFVIDEADADGLLPILHAELIDSGAMPVEETEVFGPRWREIA
GTVRPRGTPWWRGQRAHLLQLADAGTPRYVYHLPTVRARARALAAIKPIDQRYYAIKANS
HPAILQLLEAEGFGLECVSHGELKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALGVTV
TVDNVEALQRWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKESKFGLPIARVDEFVRAAT
DLGSRVVGLHAHLGSGVETAQHWRLMCDELAGFARRIGSVHTIDIGGGLPIPYSDEDEPF
DLDAWAEGLAEVKTLHPAFRLAIEPGRYLVAESGVLLTHVTQVVEKDGVRRVGLDAGMNA
LMRPALYDAWHDIENLSRQGGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIAD
AGAYGYVMANTYNQRMLPREDVIE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttccccccttgtcgatcgttggatcgtactgaagttcggcggcacttcggtg
tcgcgtcgtcaccgctgggacacgatcgggaagctggcgaaaaaacgcgcggaagagacc
ggctcgcgtgtgctggtggtggtgtcggcgctgtccggggtcaccaacgaactgaccgcg
atcgccgatggcgcgccggacagccgtgatcgcgtggccgcgctggtcgaacgccatgaa
ggcttcctggccgaactgggcctgggtcgcgaggtactggccgagcgcctggcagtgctg
cagggcctgctcgacgacccgcgtgcggccacccgtccgctgcactggcaggccgaagtg
ctgggccagggcgaactgctgtcgtccacgctgggcgcggcctatctgcacgcttcgggc
ctggacatgggctggatggatgcccgccagtggctggacgcgatgccgccgcagccgaac
cagagcgactggtcgcagcgcctgtcggtgaactgccagtggcgtgccgatgccgagtgg
atgcagcgcttccgcgcgcagccgacccgcctgctgatcacccagggtttcatctcgcgg
catgccgatggcggtaccgccatcctcggccgtggtggctcggatacctcggcggcgtac
ttcggcgcgctgctcggcgccagccgcgtggagatctggaccgatgtgccaggcatgttc
agcgccaacccgaaggatgtgccggacgcgcgcctgctgacccgcctggactattacgag
gcgcaggaaatcgccaccaccggcgccaaggtgctgcacccgcgctcgatcaagccgtgc
cgcgatgccggcgtgccgatggccatcctcgataccgagcgcccggaactgccgggcacc
agcatcgacggcagtgctgcgccggtgccgggcgtaaaggcgatcagccgccgcaacggc
atcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctggccgat
gtgttcaacctgttcaagaagcatggcctgtcggtggacctgatcggttcggccgagacc
aacgtcaccgtgtcgcttgacccgtccgagaacctggtcaacaccgatgtgctggccgcg
ctgtcggccgacctgtcgcagatctgcaaggtgaaggtgatcgtgccgtgcgcggccatc
accctggttggccgtggcatgcgttcgctgctgcacaagctgtcggacgtgtgggccacc
ttcggccgcgagcgcgtgcacatgatctcgcagtcgtccaacgacctgaacctcaccttc
gtcatcgacgaggccgatgccgatggcctgctgccgatcctgcacgccgagctgatcgac
agcggtgcgatgccggtggaggagaccgaagtgttcggcccgcgctggcgcgagatcgcc
ggcaccgtgcgcccgcgtggcacgccgtggtggcggggccagcgtgcgcacctgctgcag
ctggccgatgccggcacgccgcgttatgtctaccacctgccgacggtgcgcgcccgtgcc
cgcgcgctggccgcgatcaagccgatcgaccagcgctactacgcgatcaaggccaacagc
cacccggccatcctgcagttgctggaagccgagggcttcggtctggagtgcgtgtcgcac
ggcgaactgaagcacgtgttccagcacctgccggaactgtcgcccaagcgcgtgctgttc
acccccagcttctgcccgcgcagcgagtacgaagctgcgttcgcgctgggggtgaccgtc
accgtcgacaacgtcgaagcgctgcagcgctggccggacctgttccgcaaccgtgagctg
tggctgcgcgtcgatctgggccgtggcgaaggccaccatgccaaggttcgcactggcggc
aaggagtccaagttcggcctgccgatcgctcgtgtcgatgagttcgtgcgcgcggccacc
gatctgggcagccgcgtggtcggcctgcacgcgcacctcggcagtggcgtggaaaccgcg
cagcactggcgcctgatgtgcgatgagctggctggttttgcccgccgcatcggcagcgtg
cacaccatcgatatcggcggtggcctgccgattccgtacagtgacgaagacgagccgttc
gatctggatgcgtgggcagagggcctggccgaggtcaagacgctgcacccggcgttccgt
ctggcgatcgaaccgggtcgctatctggtggccgagtccggtgtgctgctgacccatgtc
acccaggtggtggagaaggacggcgtgcggcgtgttggcctggacgccggcatgaacgca
ctgatgcgcccggcgctgtacgacgcctggcatgacatcgagaacctcagccgccagggc
ggttatgccgaagcggcgttcgatgtggtcggcccgatctgcgaatccagcgatgtgttc
ggcaagcgccgcaagctgccggtgtcgactgcgccggacgacgtgatgctgatcgccgat
gccggtgcctacggctatgtgatggccaacacctacaaccagcggatgctgccgcgcgaa
gatgtgatcgaatga
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