KEGG   Stenotrophomonas sp. WZN-1: CCR98_05420
Entry
CCR98_05420       CDS       T04963                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K12526  bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
Organism
sten  Stenotrophomonas sp. WZN-1
Pathway
sten00260  Glycine, serine and threonine metabolism
sten00261  Monobactam biosynthesis
sten00270  Cysteine and methionine metabolism
sten00300  Lysine biosynthesis
sten00470  D-Amino acid metabolism
sten01100  Metabolic pathways
sten01110  Biosynthesis of secondary metabolites
sten01120  Microbial metabolism in diverse environments
sten01230  Biosynthesis of amino acids
Module
sten_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
sten_M00018  Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:sten00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CCR98_05420 (lysA)
   00270 Cysteine and methionine metabolism
    CCR98_05420 (lysA)
   00300 Lysine biosynthesis
    CCR98_05420 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CCR98_05420 (lysA)
  09110 Biosynthesis of other secondary metabolites
   00261 Monobactam biosynthesis
    CCR98_05420 (lysA)
Enzymes [BR:sten01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.2  Phosphotransferases with a carboxy group as acceptor
    2.7.2.4  aspartate kinase
     CCR98_05420 (lysA)
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     CCR98_05420 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N AA_kinase Orn_DAP_Arg_deC ACT_9 Ala_racemase_N ACT
Other DBs
NCBI-ProteinID: ARZ73631
LinkDB
Position
1149006..1151600
AA seq 864 aa
MSASPLVDRWIVLKFGGTSVSRRHRWDTIGKLAKKRAEETGSRVLVVVSALSGVTNELTA
IADGAPDSRDRVAALVERHEGFLAELGLGREVLAERLAVLQGLLDDPRAATRPLHWQAEV
LGQGELLSSTLGAAYLHASGLDMGWMDARQWLDAMPPQPNQSDWSQRLSVNCQWRADAEW
MQRFRAQPTRLLITQGFISRHADGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGMF
SANPKDVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDAGVPMAILDTERPELPGT
SIDGSAAPVPGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFNLFKKHGLSVDLIGSAET
NVTVSLDPSENLVNTDVLAALSADLSQICKVKVIVPCAAITLVGRGMRSLLHKLSDVWAT
FGRERVHMISQSSNDLNLTFVIDEADADGLLPILHAELIDSGAMPVEETEVFGPRWREIA
GTVRPRGTPWWRGQRAHLLQLADAGTPRYVYHLPTVRARARALAAIKPIDQRYYAIKANS
HPAILQLLEAEGFGLECVSHGELKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALGVTV
TVDNVEALQRWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKESKFGLPIARVDEFVRAAT
DLGSRVVGLHAHLGSGVETAQHWRLMCDELAGFARRIGSVHTIDIGGGLPIPYSDEDEPF
DLDAWAEGLAEVKTLHPAFRLAIEPGRYLVAESGVLLTHVTQVVEKDGVRRVGLDAGMNA
LMRPALYDAWHDIENLSRQGGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIAD
AGAYGYVMANTYNQRMLPREDVIE
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgtcagcttccccccttgtcgatcgttggatcgtactgaagttcggcggcacttcggtg
tcgcgtcgtcaccgctgggacacgatcgggaagctggcgaaaaaacgcgcggaagagacc
ggctcgcgtgtgctggtggtggtgtcggcgctgtccggggtcaccaacgaactgaccgcg
atcgccgatggcgcgccggacagccgtgatcgcgtggccgcgctggtcgaacgccatgaa
ggcttcctggccgaactgggcctgggtcgcgaggtactggccgagcgcctggcagtgctg
cagggcctgctcgacgacccgcgtgcggccacccgtccgctgcactggcaggccgaagtg
ctgggccagggcgaactgctgtcgtccacgctgggcgcggcctatctgcacgcttcgggc
ctggacatgggctggatggatgcccgccagtggctggacgcgatgccgccgcagccgaac
cagagcgactggtcgcagcgcctgtcggtgaactgccagtggcgtgccgatgccgagtgg
atgcagcgcttccgcgcgcagccgacccgcctgctgatcacccagggtttcatctcgcgg
catgccgatggcggtaccgccatcctcggccgtggtggctcggatacctcggcggcgtac
ttcggcgcgctgctcggcgccagccgcgtggagatctggaccgatgtgccaggcatgttc
agcgccaacccgaaggatgtgccggacgcgcgcctgctgacccgcctggactattacgag
gcgcaggaaatcgccaccaccggcgccaaggtgctgcacccgcgctcgatcaagccgtgc
cgcgatgccggcgtgccgatggccatcctcgataccgagcgcccggaactgccgggcacc
agcatcgacggcagtgctgcgccggtgccgggcgtaaaggcgatcagccgccgcaacggc
atcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctggccgat
gtgttcaacctgttcaagaagcatggcctgtcggtggacctgatcggttcggccgagacc
aacgtcaccgtgtcgcttgacccgtccgagaacctggtcaacaccgatgtgctggccgcg
ctgtcggccgacctgtcgcagatctgcaaggtgaaggtgatcgtgccgtgcgcggccatc
accctggttggccgtggcatgcgttcgctgctgcacaagctgtcggacgtgtgggccacc
ttcggccgcgagcgcgtgcacatgatctcgcagtcgtccaacgacctgaacctcaccttc
gtcatcgacgaggccgatgccgatggcctgctgccgatcctgcacgccgagctgatcgac
agcggtgcgatgccggtggaggagaccgaagtgttcggcccgcgctggcgcgagatcgcc
ggcaccgtgcgcccgcgtggcacgccgtggtggcggggccagcgtgcgcacctgctgcag
ctggccgatgccggcacgccgcgttatgtctaccacctgccgacggtgcgcgcccgtgcc
cgcgcgctggccgcgatcaagccgatcgaccagcgctactacgcgatcaaggccaacagc
cacccggccatcctgcagttgctggaagccgagggcttcggtctggagtgcgtgtcgcac
ggcgaactgaagcacgtgttccagcacctgccggaactgtcgcccaagcgcgtgctgttc
acccccagcttctgcccgcgcagcgagtacgaagctgcgttcgcgctgggggtgaccgtc
accgtcgacaacgtcgaagcgctgcagcgctggccggacctgttccgcaaccgtgagctg
tggctgcgcgtcgatctgggccgtggcgaaggccaccatgccaaggttcgcactggcggc
aaggagtccaagttcggcctgccgatcgctcgtgtcgatgagttcgtgcgcgcggccacc
gatctgggcagccgcgtggtcggcctgcacgcgcacctcggcagtggcgtggaaaccgcg
cagcactggcgcctgatgtgcgatgagctggctggttttgcccgccgcatcggcagcgtg
cacaccatcgatatcggcggtggcctgccgattccgtacagtgacgaagacgagccgttc
gatctggatgcgtgggcagagggcctggccgaggtcaagacgctgcacccggcgttccgt
ctggcgatcgaaccgggtcgctatctggtggccgagtccggtgtgctgctgacccatgtc
acccaggtggtggagaaggacggcgtgcggcgtgttggcctggacgccggcatgaacgca
ctgatgcgcccggcgctgtacgacgcctggcatgacatcgagaacctcagccgccagggc
ggttatgccgaagcggcgttcgatgtggtcggcccgatctgcgaatccagcgatgtgttc
ggcaagcgccgcaagctgccggtgtcgactgcgccggacgacgtgatgctgatcgccgat
gccggtgcctacggctatgtgatggccaacacctacaaccagcggatgctgccgcgcgaa
gatgtgatcgaatga

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