Stenotrophomonas sp. WZN-1: CCR98_05510
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Entry
CCR98_05510 CDS
T04963
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
CCR98_05510
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DUF7125
RecA_N
AAA_16
AAA_22
nSTAND3
MEDS
IstB_IS21
nSTAND_NTPase5
NPHP3_N
DnaB_C
NACHT
AAA_24
GvpD_P-loop
AAA_14
AAA_19
AAA_18
AAA_29
AAA_5
DEAD
AAA_33
PAXNEB
TrwB_AAD_bind
Rad51
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ARZ73648
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Position
1176695..1178191
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AA seq
498 aa
AA seq
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MQAYMRTVTGVEGLDSILGGGLPQARLYLLEGPPGSGKTTLSLQFLLEGLRRGECCLYIT
LSETAEELREVAVAHGWSLDGLHLFELGSAEGAMGNGRLQSVLHSWEMELDETVNLIMSK
VDSIGPTRVVFDSLSELRLLAQDSLRYRRQILALKQFFAPKSATVILVDDLTSTGEERDG
QLHSLCHGVLSLERLTLDFGPARRRMQVQKLRGVDFIAGYHDMVIRRGGLEIFPRLIASE
HHDRFVGSPVSSGVDEIDRLLGGGPLRGTSTLLTGPAGSGKTNVALQYVWAACERGERCC
IFEFDERIGTLLARASALDIDLDKHLHSGLLEILQMDPAEMSPGEFSWNLRKAVEQRNCS
VLVIDSLNGYVTAMPQEKQLMLQLHEMLSYLNQKGVATFLINPQHGLVGTMSTGSLNVSY
IADAVVLFRFFEAKGRIRKAISVIKNRGGAHEDTIRELKIDGRGITVSAPLADFQGILTG
TPEFVGDSAVLLGQSDAR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtacatgcggactgttaccggagtagagggactggacagcattcttggtggc
ggacttccgcaggcacggctgtatctgctggaagggccaccaggctccggcaagaccacg
ttgtcgcttcagttcctgctggaaggcctgcggcggggcgaatgttgcctgtacatcacg
ttgtccgagaccgccgaggaactgcgcgaggtcgccgttgcccatggctggtcgctggat
ggcctgcacctgttcgaactggggtcggctgaaggcgcaatgggcaacggtcgcctgcag
tcggtgctgcattcgtgggaaatggagctggacgagacggtcaatctgatcatgtccaag
gtggacagcatcgggcccacccgcgtggtgttcgattcgttgtccgaactgcgcctgctg
gcccaggactctctgcgctaccggcgccagatcctggcgttgaagcagttcttcgcgccc
aagagcgctacggtgatcctggtcgatgacctgacctctaccggcgaagagcgcgacggg
cagttgcacagcctgtgccacggcgtgctgtcgctggaacgccttaccctggatttcggc
ccggcccggcgccgcatgcaggtgcagaagctgcgcggtgtggatttcattgcgggctac
cacgatatggtgatccgtcgtggtgggctcgagatttttccccgcttgatcgcctccgag
caccacgaccggttcgtgggttcgccggtgagcagtggcgtcgacgagatcgatcgcctg
ctgggcggggggcccctgcgcggcacctcgaccctgttgactgggcccgctggcagcggc
aagaccaacgtcgccctgcaatacgtgtgggcagcctgcgaacgtggcgaacgctgctgc
atcttcgagttcgacgagcgcatcggcacgttgttggcgcgtgcatctgcgctggacatc
gacctggacaagcatctgcactcgggcctgctggagatcctgcagatggatccggccgag
atgtcgccgggtgagttctcctggaacctgcgcaaggcggtcgagcagcgcaactgcagc
gtgctggtgatcgacagccttaacggctatgtcacggcaatgccacaggaaaagcagctg
atgctgcagctgcacgagatgttgtcctacctcaaccagaagggcgtagcgacgttcctg
atcaatccgcagcatggcctggtgggcactatgtccactggcagtctcaatgtgtcctat
atcgccgatgcggtggtgctgttccggttcttcgaggccaaggggcgcatccgcaaagcc
atttcggtgatcaagaaccgcggcggtgcgcatgaggacaccatccgtgagttgaagatc
gacgggcggggcatcaccgtcagtgcgccgttggcagacttccagggcatcctgaccgga
acacccgaattcgtgggtgacagcgcggtgctgctgggccagtccgatgcccgatag
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