Stenotrophomonas sp. WZN-1: CCR98_05575
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Entry
CCR98_05575 CDS
T04963
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sten03000
]
CCR98_05575
Transcription factors [BR:
sten03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CCR98_05575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_23
HTH_38
HTH_Crp_2
Sigma70_r4_2
AIRS
HTH_24
HTH_5
MarR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ARZ73661
LinkDB
All DBs
Position
1191157..1192164
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AA seq
335 aa
AA seq
DB search
MATIYDIAKHVGVSAGTVSRALSRPDKVLPATRARIEQAAAALGYVPNTVARTLKTQRSG
KILVTVPDIANPFFAQILQGAEEAAQAVGYAVLLGDTQHQPDREERYAQMLRRNEADGMI
VLGHRLPPTAREIVGQRGAAAPVVNGCEFDPALGIPSVHIDNAAAARAVMEHLYGLGHER
IAVVGGPPDNPLHQQRLEGVRAAGKARGRLRQLSIVPGDFSVESGHAAAMALLDGTPAPT
AVFCFSDQMALGTLAACRELGIRVPDELSVVGFDDLASSRYLTPPLTTIRQPMREIGERA
VNLLLAIIEHADVPLQQTLEFSFMLRDSTAAPRRG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatctacgacatcgcaaagcacgtcggcgtctccgcgggcacggtgtcgcgt
gcgctttcccggccggacaaggtcctgcccgccacccgcgcacgcatcgagcaggccgcc
gccgccctcggctacgtgcccaacacggtggcccgcacgctcaagacccagcgcagcggc
aagatcctggtgaccgtcccggacatcgccaatccatttttcgcgcagatcctgcagggc
gcggaggaggccgcgcaggcggtcggctatgcggtcctgctgggcgatacccagcatcaa
cccgaccgcgaagaacgctacgcgcagatgctccggcgcaacgaggccgacggcatgatc
gtgctgggccatcgcctgccaccgacggcgcgcgagatcgtcgggcagcgcggcgccgcc
gcaccggtggtcaatggctgcgagttcgaccccgcactgggcattcccagcgtccacatc
gacaacgcggccgcggcacgcgcggtgatggagcatctgtacgggctgggacacgaacgg
attgccgtggtcggcgggccgcctgacaaccccctgcaccagcaacggctggaaggtgtg
cgcgcagccggcaaggcgcgcggccgcctgcgccagctgagcatcgtgccgggggatttt
tccgtggaatccgggcatgcggctgccatggcgttgttggatggcacgccggcaccgacc
gcggtgttctgcttcagtgaccagatggcgttgggtaccctggccgcctgccgggagctg
ggcatccgcgtgccggacgaactttccgtcgtcggctttgatgacctggcgtcttcccgc
tacctcacgccgccattgacgaccatccggcagcccatgcgggagattggcgagcgtgcg
gtcaacctgctgctcgccatcatcgaacacgccgacgtgccgctgcagcagacgctggag
ttcagcttcatgctgcgggattcgacggctgcgccccggcgtgggtga
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