KEGG   Stenotrophomonas sp. WZN-1: CCR98_05940
Entry
CCR98_05940       CDS       T04963                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
sten  Stenotrophomonas sp. WZN-1
Pathway
sten03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sten00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CCR98_05940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sten03400]
    CCR98_05940
DNA repair and recombination proteins [BR:sten03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CCR98_05940
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CCR98_05940
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_23 AAA_21 RsgA_GTPase nSTAND1 AAA_25 nSTAND3 DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW BTRD1
Other DBs
NCBI-ProteinID: ARZ73731
LinkDB
Position
complement(1261429..1264422)
AA seq 997 aa
MAMDFIRIRGARTHNLKNLDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
RCPDHGYPLEAQTVSQMVDQVLTLDPEQRYMLLAPVIRDRKGEHAQVFDQLRAQGFVRVR
VDGELHEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGDGMASVQSLD
TAETAPTLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPGCDGLGMAEFFDPSRVVVHP
ELSLAAGAVRGWDRRNAYYFQLIASLAKHYRFDVDATWNSLPQNVQQAVLYGSGDEAITF
TYFTEAGGRTQRKHRFEGIIPNLERRYKETESPAVREELSKYISEQPCPECHGARLNKAA
RNVFVADRPLPELVVLPIDEALKFFSELSLPGWRGEIAAKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADHVLDIGPGAGVHGGEIVGQGTLQDILEAPRSLTGQYLSGKRAI
EIPARRHKPNPKMTLHLRGASGNNLKGVDLAIPSGLLTCVTGVSGSGKSTLINDTLFSLA
ANEINGSSHPIAPYKEIDGLDLFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEIL
YKGFNINDVLEMTVEDALKLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVTGTPEDVAACPQSYTGQFLARMLPSTSARPDQPAAVANKPDA
RPPRKVKPEKPTKVAKKAVAAKSTGKASKSTTKKKDA
NT seq 2994 nt   +upstreamnt  +downstreamnt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctgaagaacctcgac
ctcgacctgccccgcgacaagctgatcgtgatcaccggcctgtccggctcgggcaagtcc
tcgctggcgttcgacaccatctatgcagaaggccagcgccgctacgtcgagtcgctgtcg
gcctacgcacgccagttcctgagcgtgatggaaaagccggacctggaccacatcgagggc
ctgtccccggcaatctcgatcgagcagaagtcgacctcgcacaacccgcgttcgaccgtc
ggcacgatcaccgagatctacgattacctgcgcctgctgtacgcccgcgtcggcaccccg
cgctgcccggaccacggctatccgctggaagcgcagacggtcagccagatggtcgaccag
gtactgaccctggacccggaacagcgctacatgctgctggccccggtcatccgcgaccgc
aagggcgagcacgcgcaggtgttcgaccagctgcgcgcgcagggcttcgtgcgcgtgcgc
gtggatggcgagctgcatgaaatcgatgcggtgccgccgcttgcactgcgccagaagcac
accatcgaggcggtgatcgaccgcttccgcccgcgcgaggacatcaagcagcgcctggcc
gagagtttcgagaccgcgctgaaactcggcgacggcatggcctcggtgcagagcctggac
acggccgagaccgcgccgaccctgttctcctccaagtactcctgcccggtctgcgattac
tcgctgccggagctggaaccgcgcctgttctcgttcaacgcgccgatgggcgcctgcccg
ggctgcgatggcctgggcatggccgaattcttcgatccttcgcgcgtggtggtgcacccc
gagctgtcgctggccgccggtgcggtgcgcggctgggatcgccgcaacgcctactacttc
cagctgatcgcctcgctggccaagcactacaggttcgatgtcgacgcgacgtggaactcg
ctgccgcagaacgtgcagcaggccgtgctgtacggcagtggcgatgaagcgatcaccttc
acctacttcaccgaagccggtggccgcacccagcgcaagcaccgcttcgaaggcatcatt
cccaacctcgagcgccgctacaaggaaaccgaatcgccggcggtgcgcgaggagctgtcc
aagtacatcagcgaacagccgtgcccggaatgccatggcgcgcgcctgaacaaggcggcc
cgcaacgtgttcgtggccgaccgcccgctgccggagctggtggtgctgccgatcgacgag
gcgctgaagttcttcagcgaactgagcctgccaggctggcgtggcgagatcgccgcgaag
atcgtcaaggaaatcggtgagcgcctcggcttcctggtcgatgtgggcctggattacctg
accctggagcgcaaggccgacaccctgtccggtggcgaggcacagcgcatccgcctggcc
agccagatcggtgccggcctggtcggcgtgatgtacgtgctcgacgagccgtcgatcggc
ctgcaccagcgcgacaacgagcgcctgctcggcacccttacccgcctgcgcgacctcggc
aacacggtgatcgtggtcgagcatgacgaggatgcgatccgcctggccgaccacgtgctg
gacatcggcccgggcgcgggcgtgcacggcggcgagatcgtcggccagggcaccctgcag
gacatcctggaggcaccgcgctcgctgaccggccagtacctgtcgggcaagcgcgcgatc
gagatccccgcgcgccggcacaagccgaacccgaagatgaccctgcacctgcgcggggcc
agcggcaacaacctcaagggcgtggacctggcgattccgtcgggcctgctgacctgcgtg
accggtgtgtccggctccggcaagtcgaccctgatcaacgacaccctgttctcgctggcc
gccaacgagatcaacggttcctcgcacccgatcgccccgtacaaggagatcgatggcctg
gacctgttcgacaaggtggtggacatcgaccagtcgccgatcggccgcaccccgcgttcg
aacccggccacctacaccggcctgttcacccccctgcgcgaactgttcgcgcaggtgccc
gaagcgcgtgcgcgcggctactcgccgggccgtttcagcttcaacgtgcgcggtggccgc
tgcgaagcctgccagggcgacggcctgatcaaggtcgagatgcacttcctgccggacgtg
tacgtgccgtgcgatgtctgccatggcaagcgctacaaccgcgaaacgctggagatcctg
tacaagggcttcaacatcaacgacgtgctggaaatgaccgtcgaggatgcactgaagctg
ttcgagccggtgccgtcgatcgcacgcaagctggaaacgctggtcgacgtcggcctgagc
tacatcaagctgggccagagcgcgaccacgctgtccggtggtgaagcacagcgtgtgaag
ctgtccaaggaactgtcgcgccgcgataccggccgcaccctgtacatcctcgacgaaccg
accaccggcctgcacttccacgacatcgaagcgctgctgggcgtgctgcacaagctgcgc
gacgaaggcaacacggtggtggtgatcgaacacaacctggatgtgatcaagaccgccgac
tggatcgtcgacctgggtccggaaggcggccaccgcggtggcaccatcctggtcaccggc
acgccggaagacgtggcggcctgcccacagtcgtacaccggccagttccttgcgcgcatg
ctgccgtccaccagcgcgcgccccgatcagccggccgccgtggccaacaagcccgatgcg
cgtccgccgcgcaaggtgaagcctgaaaagcctaccaaggtggcgaagaaggccgtggcc
gccaagagcaccggcaaggccagcaagagcacgacgaagaagaaggacgcctga

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