Stenotrophomonas sp. WZN-1: CCR98_06075
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Entry
CCR98_06075 CDS
T04963
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_06075
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CCR98_06075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_22
AAA_16
Lon_C
AAA_24
SLFN-g3_helicase
nSTAND_NTPase5
AAA
PAXNEB
Zn_ribbon_8
nSTAND3
AAA_30
zf-C2H2_6
Rad51
RecA_N
MCM
AAA_33
NACHT
DAP3
Motif
Other DBs
NCBI-ProteinID:
ARZ73757
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Position
1295087..1296463
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AA seq
458 aa
AA seq
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MAKARTAYVCNECGAEFSKWQGQCTECNAWNSLSEIVLESAAAAKAPASRRAGWAGKIDP
PKITALKDVEQTEHRRVSTGIGEFDRVLGGGLVEGAVVLVGGDPGIGKSTLLLQAVAKMA
AVLPVLYVTGEESLAQVAGRAHRLELPLDGVNALAETGVESILQHASKAGPRLIVADSVQ
TLWTESLTAAPGSVSQVRESAARLVRFAKETGTAVFLVGHVTKEGGIAGPRVLEHMVDAV
LYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGDKGLKEVSNPSAIFLSGGSTHQPGSCV
MVTREGTRPLLVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGVLVGDQDVFV
NVVGGIRVQETAADLPVLLAVLSSLQDRPLAEKTIAFGEVGLSGEIRPVPNGEDRLREAA
THGFKRAIVPKANAPKGGSVKGMEVIAVERLSEAIDAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcccgcaccgcctacgtctgcaatgaatgcggcgccgaattcagcaagtgg
cagggccaatgcaccgagtgcaacgcctggaactcgctgtcggaaatcgtgctggaaagc
gcggcggcggccaaggcgccggcctcgcgccgggccggctgggccggcaagatcgacccg
ccgaagatcaccgcgctgaaggacgtggagcagaccgagcatcgcagggtctccaccggc
atcggcgagttcgaccgggtgctgggcggtggcctggtcgagggcgcggtggtgctggtc
ggtggcgatccgggcatcggcaagtcgacgctgcttctgcaggcggtggcgaagatggcc
gccgtgctgccggtgctgtacgtcacgggcgaggagtcgctggcgcaggtcgccggccgc
gcgcaccggctggagctgccgctggacggggtcaacgcgctggccgagaccggggtggag
tcgatcctgcagcatgcatccaaggccggcccgcggctgatcgtggccgactccgtgcag
accctgtggaccgagagcctgaccgctgcgccgggatcggtcagccaggtgcgcgagagc
gcggcacggctggtgcggttcgccaaggagaccggcaccgccgtgttcctggtcggccac
gtgaccaaggagggcggcatcgctggtccgcgcgtgctcgagcacatggttgacgcggtg
ctgtacttcgagggcgagagcggcagccgcttccgcctgctgcgcgcgttcaagaaccgc
ttcggtgcggtcaacgaactgggcgtgttcgcgatgggcgacaagggcctgaaggaggtc
tccaacccatcggcgatcttcctgtccggcggcagcacccatcaaccgggcagctgcgtg
atggtcacccgcgagggcacccggccgctgctggtggaagtgcaggcgctggtcgatgcg
tcgccgctgtcgaacccgcgccgtgtcgcggtcggcctggagcagaaccgcctggccatg
ctgctggcggtgctgcatcgccacgggggcgtgctggttggcgaccaggacgtgttcgtc
aacgtggtcggtggcatccgcgtgcaggagaccgccgccgacctgccggtgctgctggcg
gtactgtcctcgctgcaggatcggccgttggcggaaaagaccattgccttcggcgaggtg
ggcctgtccggcgagatccgcccggtgcccaatggcgaagaccgcctgcgcgaggccgcc
acccatggcttcaagcgcgccatcgtgcccaaggccaatgcgcccaagggcggttcggtg
aagggcatggaagtgatcgcggtggagcgcctgtccgaggcgatcgacgcggcgtga
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