Stenotrophomonas sp. WZN-1: CCR98_06490
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Entry
CCR98_06490 CDS
T04963
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCR98_06490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sten03000
]
CCR98_06490
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_06490
Enzymes [BR:
sten01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CCR98_06490
Transcription factors [BR:
sten03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CCR98_06490
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCR98_06490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
CobS_N
Motif
Other DBs
NCBI-ProteinID:
ARZ73835
LinkDB
All DBs
Position
complement(1396536..1398014)
Genome browser
AA seq
492 aa
AA seq
DB search
MDTALALDTAACDRARLARDARFDGVFFTAVRSTGIYCRPVCPAPPPKPRNITYYPTAAA
AAAAGYRPCLRCRPELAPQAQQALAGQTVQRALALIHGGFLQEQPVADLATKLGLSARQL
QRLFVEHLGATPGQIHATHRLLLAKQLLTETTLPVTDVALAAGYNSLRRFNTAFLQGCGM
APTALRRQHQPLAADDGGLVLRLGYRPPLDFPRMLAFLRKRSLPGIELIGEDSYQRVLGT
PERPTLLRVTADPKRPELRLQLGAVDPRLIPDIVRRVRRVFDLDADLQQVHAALGEEPLL
ARGITERPGLRVPGGWDGFEVGVRAVLGQQVTVAAATTFARRLVDAYGAHLPGMPSDFDR
QFPAPEVLAEAPLESIGLPRSRAATVRALATACANGQLDFGPGQALEEFVTRCVALPGIG
PWTAQYIALRGLGQPDAFPAGDLVLQQVLGHAQGQRLSERATEARSQPWRPWRAYAVLHL
WHLSGTFVGEPT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccctcgccctcgacaccgccgcctgtgaccgcgcccgcctggcccgcgac
gcacgcttcgacggcgtgttcttcaccgccgtgcgcagcaccggcatctattgccgcccg
gtgtgccccgcaccgcccccgaagccgcgcaacatcacctattacccgaccgccgctgcc
gccgccgctgccggctatcgcccgtgcctgcgctgccgcccggagctggcaccacaggcc
cagcaggcactggccgggcagaccgtgcagcgcgccctggccctgatccacggtggcttc
ctgcaggagcagccggtagccgatcttgcaacgaagcttggtctcagtgcgcgccagctg
cagcgcctgttcgtcgagcacctgggtgcgacacccgggcagatccatgccacccatcgc
ctgctgctggccaagcagctgctgaccgaaaccacgctgccggtgaccgacgtcgcgctg
gccgccggctacaacagcctgcgccgtttcaataccgcgttcctgcagggctgcggcatg
gcgcccaccgcactgcgccgccagcatcaaccactggccgccgacgatggcggcctggtg
ctgcgcctgggctaccgtccaccgctggacttcccgcgcatgctggcgttcctgcgcaag
cgcagcctgcccggcatcgaactgatcggcgaggacagctaccagcgcgtgctgggcacg
ccggagcgccccaccttgctgcgcgtcactgcggacccgaagcgcccggagctgcgcctg
cagctgggtgcggtggatccgcgcctgatcccggacatcgtgcgccgcgtgcgtcgcgtg
ttcgatctggatgccgacctgcagcaggtccacgcggcactgggtgaggaacccttgctg
gcgcgcggcatcaccgagcgccccgggctgcgcgtgcccggtggctgggatggcttcgag
gtcggcgtgcgcgcggtgctcggccagcaggtcacagttgccgcagccaccaccttcgcg
cggcggctggtcgatgcctatggcgcgcacctgccgggcatgccgtccgacttcgatcgc
cagttccccgcgcccgaggtattggccgaggcgccgctggaatcgatcggcctgccgcgc
agccgcgccgccaccgtgcgtgcattggccaccgcctgcgccaacggccagctcgacttc
gggcccggccaggcgctggaggagttcgttacccgctgcgtggcactgcccggcatcggt
ccgtggaccgcgcagtacatcgccctgcgtggcctcggccagcccgatgccttcccggcc
ggcgatcttgtgctgcagcaggtcctcggccacgcgcagggccagcgcctgagcgagcgc
gcgaccgaagcgcgctcgcaaccgtggcgcccatggcgcgcctatgccgtactgcacctg
tggcacctgtccggtactttcgttggagaaccgacatga
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