Stenotrophomonas sp. WZN-1: CCR98_07190
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Entry
CCR98_07190 CDS
T04963
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sten03016
]
CCR98_07190
Enzymes [BR:
sten01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CCR98_07190
Transfer RNA biogenesis [BR:
sten03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CCR98_07190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ARZ73966
LinkDB
All DBs
Position
complement(1558511..1559929)
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AA seq
472 aa
AA seq
DB search
MTGTPDVFPPATPGGTPLVALPAGPRKPDQVKGKLYIKTHGCQMNEYDSAKMADVLAASD
GLELTDSPEDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGE
AIIKRAPFVDLVFGPQTLHRLPELIRARREQKRPQVDISFPEIEKFDRLPEPRAEGASAF
VSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPY
GDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGS
DRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGF
DHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAAGISEKMIGTVQTVLVE
GPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVVITEALTNSLRARVVAE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacgccagacgtctttccgcccgccacgccgggcggtaccccgctcgttgcc
ctgcccgctggtccgcgcaagcccgaccaggtgaaaggcaagctgtacatcaagacccac
ggttgccagatgaacgagtacgactcggccaagatggccgacgtgcttgccgccagcgat
ggcctggaactgaccgacagcccggaagacgccgacgtcatcctggtcaacacctgctcc
atccgcgagaaggcgcaggagaaggtgttcagccagctcggcgtgtggaagggcctgaag
aacaagggccgcgaggtcatcatcggggtgggcggctgcgtcgcgtcgcaggaaggcgaa
gcgatcatcaagcgcgcgccgttcgtcgacctggtgttcggcccacagaccctgcaccgt
ctgccggagctgatccgtgcacgtcgcgagcagaagcggccgcaggtggacatcagcttc
cccgagatcgagaagttcgaccgcctgcccgagccgcgtgccgaaggcgcttcggcgttc
gtgtcgatcatggaaggctgttccaagtactgctcgttctgcgtggtgccctacacccgc
ggcaccgaagtcagccgcccgttcgaggacgtggtggtggaagtggcgcagttggccgcg
cagggcgtgcgcgagatcaacctgctcggccagaacgtcaacgcctaccgtggaccctat
ggggatggcgaattcgccgacctcggcctgctgatccgcaccatcgccgagatcgatggc
gtcggccgcatccgcttcaccacctcgcatccgctggagttcagcgattcgctgatcgac
gcgttccgcgacgtgccgcagctggccaacttcctgcacctgccggtacaggctggcagc
gaccgcgtgctgtcggcgatgaagcgcggttacaccgcgctggaattcaagtcgaagatc
cgcaagctgcgcgcggtgcgcccggacatctcgatcagctcggacttcatcgtcggcttc
cccggcgagaccgatgccgatttcgagaagaccatgaagctgatcgaggacatcggcttc
gaccacagcttctccttcatctattcgcgtcgcccgggtacgccggctgcggacctggag
gacacgatcagcgatgccgagaagcacgcgcgcctgtcgcgcctgcaggagcgcatcaat
gcgcatgccgccggcatttccgagaagatgatcggcaccgtgcagaccgtgctggtggaa
ggcccctcgcgcaagaacccgaacgagctgaccggcaagaccgagaacatgcgttcggtg
aacttcccggcgccggcgcggttgatcggccagttcgtggacgtggtgatcaccgaagcg
ctgaccaattcgctgcgcgcgcgcgtggtggcggaataa
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